RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SEC22CQ9BRL7 303 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 GPR174Q9BXC1 333 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 LMAN2LQ9H0V9 348 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 ACSS1Q9NUB1 689 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-201ENST00000286835 FAM25EA8MYX2 175 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 CASC3O15234 703 aaKnown RBP12.48□□□□□ -0.41
SCAF4-201ENST00000286835 SOX30O94993 753 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 HLA-DQA2P01906 255 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 CSN2P05814 226 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 ITGB8P26012 769 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 HTR1FP30939 366 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 ZNF155Q12901 538 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-201ENST00000286835 C19orf48Q6RUI8 117 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 ENPP7Q6UWV6 458 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 MEPCEQ7L2J0 689 aaKnown RBP12.48□□□□□ -0.41
SCAF4-201ENST00000286835 LMLNQ96KR4 655 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 HHIPQ96QV1 700 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 ZNF559Q9BR84 538 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 MED18Q9BUE0 208 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 GPN1Q9HCN4 374 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-201ENST00000286835 TCF7L1Q9HCS4 588 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 FGF20Q9NP95 211 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-201ENST00000286835 DZANK1Q9NVP4 752 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 ASB4Q9Y574 426 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 SPACA6W5XKT8 324 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 CDHR4A6H8M9 788 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 MEIS3P1A6NDR6 274 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 E9PI62 339 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-201ENST00000286835 HIST1H1TP22492 207 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-201ENST00000286835 GRK1Q15835 563 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 RTL4Q6ZR62 310 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 THAP4Q8WY91 577 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 AUNIPQ9H7T9 357 aa12.48□□□□□ -0.41
SCAF4-201ENST00000286835 TESQ9UGI8 421 aaKnown RBP12.48□□□□□ -0.41
SCAF4-201ENST00000286835 ANKRD61A6NGH8 418 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 ACOD1A6NK06 481 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 SLC22A31A6NKX4 558 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 PTHLHP12272 177 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 OMPP47874 163 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 CRMP1Q14194 572 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 ATXN7L3Q14CW9 347 aaPredicted RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 PUS10Q3MIT2 529 aaKnown RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 PARGQ86W56 976 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 MOSPD2Q8NHP6 518 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 AHCYL2Q96HN2 611 aaKnown RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 HS6ST2Q96MM7 605 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 PDCD1LG2Q9BQ51 273 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 SLC27A6Q9Y2P4 619 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 A0A1W2PR48 441 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 HPGDP15428 266 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 CMPK1P30085 196 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 FGF9P31371 208 aaPredicted RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 NUP62P37198 522 aaPredicted RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 GDNFP39905 211 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 PBX2P40425 430 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 KIAA1024LP59773 190 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 AGERQ15109 404 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 C4orf46Q504U0 113 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 TAF8Q7Z7C8 310 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 DUSP18Q8NEJ0 188 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 ARRDC3Q96B67 414 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 ORAI3Q9BRQ5 295 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 PDCD10Q9BUL8 212 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 AKAP7Q9P0M2 348 aaPredicted RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 LOC100509620A0A075B734 347 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 SURF4O15260 269 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 RBMS1P29558 406 aaKnown RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 STARP49675 285 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 ILF3Q12906 894 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 LRRC37A5PQ49AS3 106 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 TMEM69Q5SWH9 247 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 ZNF782Q6ZMW2 699 aaPredicted RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 ERN2Q76MJ5 926 aaKnown RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 C9orf62Q8N4C0 152 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 LSM14AQ8ND56 463 aaKnown RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 LGALS14Q8TCE9 139 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 HCAR2Q8TDS4 363 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 TMEM239Q8WW34 195 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 CNRIP1Q96F85 164 aaPredicted RBP12.47□□□□□ -0.41
SCAF4-201ENST00000286835 OR2M2Q96R28 347 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 OR14A2Q96R54 314 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.47□□□□□ -0.418e-15■■■■■ 32
SCAF4-201ENST00000286835 SOHLH2Q9NX45 425 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 LIPT1Q9Y234 373 aa12.47□□□□□ -0.41
SCAF4-201ENST00000286835 PRAMEF27A3QJZ7 478 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 TRABD2BA6NFA1 517 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 RGS11O94810 467 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 RECKO95980 971 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 TP53P04637 393 aaPredicted RBP12.46□□□□□ -0.41
SCAF4-201ENST00000286835 GDI2P50395 445 aaKnown RBP12.46□□□□□ -0.41
SCAF4-201ENST00000286835 AGFG1P52594 562 aaKnown RBP12.46□□□□□ -0.41
SCAF4-201ENST00000286835 AP3S2P59780 193 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 GXYLT1Q4G148 440 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 TMED4Q7Z7H5 227 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 GPALPP1Q8IXQ4 340 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 HSPA12BQ96MM6 686 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 SYNPO2LQ9H987 977 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 FZD3Q9NPG1 666 aa12.46□□□□□ -0.41
SCAF4-201ENST00000286835 SIDT1Q9NXL6 827 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms