RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ZG16BQ96DA0 208 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 DNAJA3Q96EY1 480 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 REXO5Q96IC2 774 aaKnown RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 MRGPRX4Q96LA9 322 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 KLHL15Q96M94 604 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 DMRTA2Q96SC8 542 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 ZNF607Q96SK3 696 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 NPAS1Q99742 590 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 KLHDC3Q9BQ90 382 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 SPATA5L1Q9BVQ7 753 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 CCDC106Q9BWC9 280 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 LAT2Q9GZY6 243 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 SAP130Q9H0E3 1048 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 SERINC1Q9NRX5 453 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 RLIMQ9NVW2 624 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 PLEKHB1Q9UF11 243 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 RNF6Q9Y252 685 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 ARL2BPQ9Y2Y0 163 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 IFT52Q9Y366 437 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 MRPS18CQ9Y3D5 142 aaKnown RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 GPC6Q9Y625 555 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 AP4B1Q9Y6B7 739 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 EXPH5Q8NEV8 1989 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 TLN1Q9Y490 2541 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 A0A0G2JNJ9 132 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CLEC18AA5D8T8 446 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 NKX2-6A6NCS4 301 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 PRORSD1PA6NEY8 169 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 HSPB2A8KAH6 182 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 EEF1E1-BLOC1S5C9J1V9 151 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 DVL2O14641 736 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 GSTA4O15217 222 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 EEF1E1O43324 174 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 FRS3O43559 492 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CXCL13O43927 109 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 SERPINB7O75635 380 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 PGM3O95394 542 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CLDN14O95500 239 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 EPPINO95925 133 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 THBS1P07996 1170 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 GUSBP08236 651 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 TMIGD3P0DMS9 266 aaPredicted RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 ETS2P15036 469 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CPN1P15169 458 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 GPX2P18283 190 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 IL11P20809 199 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 ELK4P28324 431 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CHRNB4P30926 498 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 ADH7P40394 386 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 AGFG1P52594 562 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 SUCLG1P53597 346 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 SESN3P58005 492 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 SIRPAP78324 504 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 SELENBP1Q13228 472 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 PON3Q15166 354 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 MAPK11Q15759 364 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 HSPB2Q16082 182 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 BCL2A1Q16548 175 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 LRRC23Q53EV4 343 aaPredicted RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 INTS11Q5TA45 600 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 NSUN5P2Q63ZY6 315 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 HBMQ6B0K9 141 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 RTL6Q6ICC9 239 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 NANOGP8Q6NSW7 305 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 C3orf33Q6P1S2 294 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CLEC18BQ6UXF7 455 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 MAMDC2Q7Z304 686 aaPredicted RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 ZNF550Q7Z398 422 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 ARPINQ7Z6K5 226 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 ZZZ3Q8IYH5 903 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 ZNF440Q8IYI8 595 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 METTL25Q8N6Q8 603 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CNEP1R1Q8N9A8 125 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 SMYD1Q8NB12 490 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CLEC18CQ8NCF0 446 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CCDC197Q8NCU1 140 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 OR8J3Q8NGG0 315 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 OR10D3Q8NH80 312 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 OR2V1Q8NHB1 315 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 VANGL1Q8TAA9 524 aaPredicted RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 POC1BQ8TC44 478 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 ZPLD1Q8TCW7 415 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 ST8SIA1Q92185 356 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 MARVELD3Q96A59 401 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 INTS12Q96CB8 462 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 CMTM5Q96DZ9 223 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 ZNF845Q96IR2 970 aaPredicted RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 LRRC37BQ96QE4 947 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 OR5B2Q96R09 309 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CCT8L2Q96SF2 557 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 TM9SF2Q99805 663 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 SPATA9Q9BWV2 254 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 UCK2Q9BZX2 261 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 TMEM38AQ9H6F2 299 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 KAT8Q9H7Z6 458 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 NANOGQ9H9S0 305 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 EFCAB1Q9HAE3 211 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 EXOSC3Q9NQT5 275 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 CTPS2Q9NRF8 586 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms