RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 UBE2IP63279 158 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SRSF3P84103 164 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 HSPB3Q12988 150 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 NDUFA9Q16795 377 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 LRRC73Q5JTD7 316 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 ZDHHC20Q5W0Z9 365 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 C12orf45Q8N5I9 185 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 TMEM185AQ8NFB2 350 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 OR6S1Q8NH40 331 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 RXFP4Q8TDU9 374 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 FBXO17Q96EF6 278 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 LRIG1Q96JA1 1093 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 ZNF75AQ96N20 296 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 TSNAXQ99598 290 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 TTTY10Q9BZA0 68 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 ANKRD10Q9NXR5 420 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 MED11Q9P086 117 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 MYEF2Q9P2K5 600 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 OR10H1Q9Y4A9 318 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 EFCAB7A8K855 629 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 PYCARD-AS1I3L0S3 204 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SULT1C2O00338 296 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 GOSR2O14653 212 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 PGRMC2O15173 223 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 MAGEB4O15481 346 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 REM1O75628 298 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 AQP8O94778 261 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SLC16A8O95907 504 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SELLP14151 372 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 PTAFRP25105 342 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 GATMP50440 423 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 PRMT2P55345 433 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SNRPEP62304 92 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 PITPNAQ00169 270 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SORDQ00796 357 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 RIPPLY1Q0D2K3 151 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 ZNF177Q13360 481 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 ACSM3Q53FZ2 586 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 CLLU1OSQ5K130 101 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 ELFN2Q5R3F8 820 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 PIP5KL1Q5T9C9 394 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 C5orf46Q6UWT4 87 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SLCO4C1Q6ZQN7 724 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 MOB3CQ70IA8 216 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 IKBIPQ70UQ0 350 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 OR6V1Q8N148 313 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SLC44A3Q8N4M1 653 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 RFLNBQ8N5W9 214 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 ZNF740Q8NDX6 193 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 OR6K3Q8NGY3 331 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 WFDC5Q8TCV5 224 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SPSB2Q99619 263 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SLC25A32Q9H2D1 315 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 CCDC86Q9H6F5 360 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 MYNNQ9NPC7 610 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 GKN1Q9NS71 199 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 SIRT3Q9NTG7 399 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 EPHA6Q9UF33 1036 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 CD84Q9UIB8 345 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 FBXL3Q9UKT7 428 aa8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 GPR55Q9Y2T6 319 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 PRG3Q9Y2Y8 225 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 AK6Q9Y3D8 172 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-201ENST00000274901 LAMA2P24043 3122 aaKnown RBP8.52□□□□□ -1.04
HMGCLL1-201ENST00000274901 USP34Q70CQ2 3546 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 TRAV14DV4A0A0A6YYC5 116 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 SCAMP1O15126 338 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 CTDSPLO15194 276 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 CLDN11O75508 207 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 POP7O75817 140 aaKnown RBP8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 VNN2O95498 520 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 ECDO95905 644 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 SERPINA3P01011 423 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 RPLP2P05387 115 aaKnown RBP8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 MRPL3P09001 348 aaKnown RBP8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 SYN1P17600 705 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 XPAP23025 273 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 IMPA1P29218 277 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 OMPP47874 163 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 NPBWR1P48145 328 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 SMIM11AP58511 58 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 PTSQ03393 145 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 FAM69AQ5T7M9 428 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 PRAMEF13Q5VWM6 474 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 LYPLAL1Q5VWZ2 237 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 PLBD1Q6P4A8 553 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 FIP1L1Q6UN15 594 aaKnown RBP8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 CRTC1Q6UUV9 634 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 C6orf120Q7Z4R8 191 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 CAMKVQ8NCB2 501 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 OR5J2Q8NH18 312 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 CLP1Q92989 425 aaKnown RBP8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 RFKQ969G6 155 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 SLC25A38Q96DW6 304 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 PTDSS2Q9BVG9 487 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 MFFQ9GZY8 342 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 BRD9Q9H8M2 597 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 DMRT3Q9NQL9 472 aa8.52□□□□□ -1.05
HMGCLL1-201ENST00000274901 NIT2Q9NQR4 276 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms