RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 ANKRD60Q9BZ19 345 aa16.33■□□□□ 0.2
SEC22C-202ENST00000273156 WWTR1Q9GZV5 400 aa16.33■□□□□ 0.2
SEC22C-202ENST00000273156 STMN3Q9NZ72 180 aa16.33■□□□□ 0.2
SEC22C-202ENST00000273156 ABI3Q9P2A4 366 aa16.33■□□□□ 0.2
SEC22C-202ENST00000273156 PPIEQ9UNP9 301 aaKnown RBP16.33■□□□□ 0.2
SEC22C-202ENST00000273156 DOPEY2Q9Y3R5 2298 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 CENPVL1A0A0U1RR11 272 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 CDHR4A6H8M9 788 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 ARRDC5A6NEK1 342 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 TO15178 435 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 SEMA7AO75326 666 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 ITGAMP11215 1152 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 LCN1P31025 176 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 KRT20P35900 424 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 TAS2R41P59536 307 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 NPTX1Q15818 432 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 FGD3Q5JSP0 725 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 RANBP3LQ86VV4 465 aaPredicted RBP16.32■□□□□ 0.2
SEC22C-202ENST00000273156 ZNF614Q8N883 585 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 NFAM1Q8NET5 270 aaPredicted RBP16.32■□□□□ 0.2
SEC22C-202ENST00000273156 HSPBAP1Q96EW2 488 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEC22C-202ENST00000273156 TOR3AQ9H497 397 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 ZNF556Q9HAH1 456 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 MMP25Q9NPA2 562 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 TMEFF2Q9UIK5 374 aaPredicted RBP16.32■□□□□ 0.2
SEC22C-202ENST00000273156 NUP210LQ5VU65 1888 aa16.32■□□□□ 0.2
SEC22C-202ENST00000273156 A0A1W2PRQ8 180 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 CLDN24A6NM45 220 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 NPIPB9F8W1W9 429 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 FRS3O43559 492 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 OXSR1O95747 527 aaPredicted RBP16.31■□□□□ 0.2
SEC22C-202ENST00000273156 EDN3P14138 238 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 NR0B1P51843 470 aaKnown RBP16.31■□□□□ 0.2
SEC22C-202ENST00000273156 ADARB1P78563 741 aaKnown RBP16.31■□□□□ 0.2
SEC22C-202ENST00000273156 IL1RL1Q01638 556 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 ST3GAL3Q11203 375 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 DGCR6Q14129 220 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 PDZK1Q5T2W1 519 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 KRT80Q6KB66 452 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 HSDL2Q6YN16 418 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 CHERPQ8IWX8 916 aaKnown RBP16.31■□□□□ 0.2
SEC22C-202ENST00000273156 CMIPQ8IY22 773 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 LINC00471Q8N535 108 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 ZNF527Q8NB42 609 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 GRHL3Q8TE85 626 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 TP53INP1Q96A56 240 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 VMP1Q96GC9 406 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 FEVQ99581 238 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 MCHR1Q99705 422 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 PSD2Q9BQI7 771 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 POLR2J2Q9GZM3 115 aaKnown RBP16.31■□□□□ 0.2
SEC22C-202ENST00000273156 POLR2J3Q9H1A7 115 aaKnown RBP16.31■□□□□ 0.2
SEC22C-202ENST00000273156 UBQLN4Q9NRR5 601 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 KRT84Q9NSB2 600 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 ESPL1Q14674 2120 aa16.31■□□□□ 0.2
SEC22C-202ENST00000273156 MAGEA13PA6NCF6 341 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 OR5H15A6NDH6 313 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 FAAHO00519 579 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 RNF4P78317 190 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 ANKRD34AQ69YU3 496 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 H3F3CQ6NXT2 135 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 GRAMD2AQ8IUY3 354 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 OFCC1Q8IZS5 231 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 SLC5A8Q8N695 610 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 DIO2Q92813 273 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 SLC35B4Q969S0 331 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 EFHD2Q96C19 240 aaPredicted RBP16.3■□□□□ 0.2
SEC22C-202ENST00000273156 FAM118AQ9NWS6 357 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 NTNG1Q9Y2I2 539 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 SPTBN1Q01082 2364 aaKnown RBP16.3■□□□□ 0.2
SEC22C-202ENST00000273156 FMO6PO60774 539 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 REM1O75628 298 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 CYP7B1O75881 506 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 WDPCPO95876 746 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 CELA2AP08217 269 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 HPGDP15428 266 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 MYF6P23409 242 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 ELAVL4P26378 380 aaKnown RBP16.3■□□□□ 0.2
SEC22C-202ENST00000273156 FOXD4Q12950 439 aaPredicted RBP16.3■□□□□ 0.2
SEC22C-202ENST00000273156 FGFBP1Q14512 234 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 ENTPD8Q5MY95 495 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 ACER2Q5QJU3 275 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 SWT1Q5T5J6 900 aaKnown RBP16.3■□□□□ 0.2
SEC22C-202ENST00000273156 PLEKHM3Q6ZWE6 761 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 APCDD1LQ8NCL9 501 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 OR5L2Q8NGL0 311 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 OR8K3Q8NH51 312 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 ANKRD19PQ9H560 264 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 PLA2G3Q9NZ20 509 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 SLC5A6Q9Y289 635 aa16.3■□□□□ 0.2
SEC22C-202ENST00000273156 SHANK1Q9Y566 2161 aa16.29■□□□□ 0.2
SEC22C-202ENST00000273156 TRBV4-1A0A0J9YWV2 114 aa16.29■□□□□ 0.2
SEC22C-202ENST00000273156 CPSF4LA6NMK7 179 aaKnown RBP16.29■□□□□ 0.2
SEC22C-202ENST00000273156 PRKNO60260 465 aaPredicted RBP16.29■□□□□ 0.2
SEC22C-202ENST00000273156 TPST2O60704 377 aa16.29■□□□□ 0.2
SEC22C-202ENST00000273156 UGT2B11O75310 529 aa16.29■□□□□ 0.2
SEC22C-202ENST00000273156 OR5F1O95221 314 aa16.29■□□□□ 0.2
SEC22C-202ENST00000273156 CRYABP02511 175 aaKnown RBP16.29■□□□□ 0.2
SEC22C-202ENST00000273156 IL12BP29460 328 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms