RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SNTNA6NMZ2 147 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 PATE3B3GLJ2 98 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 PTP4A3O75365 173 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 SLC2A10O95528 541 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 MTNR1AP48039 350 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 EBPQ15125 230 aaKnown RBP15.28■□□□□ 0.04
CCDC40-201ENST00000269318 SSX1Q16384 188 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 RPL13AP3Q6NVV1 102 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 PAQR6Q6TCH4 344 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 BMP8AQ7Z5Y6 402 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 SLITRK4Q8IW52 837 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 C9orf40Q8IXQ3 194 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 OR2I1PQ8NGU4 316 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 NAT6Q93015 286 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 RNF31Q96EP0 1072 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 PMF1-BGLAPU3KQ54 211 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 MUC3AQ02505 3323 aa15.28■□□□□ 0.04
CCDC40-201ENST00000269318 IGLV3-12A0A075B6K2 115 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 ARHGAP33O14559 1287 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 RCBTB2O95199 551 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 TIAF1O95411 115 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 SCG5P05408 212 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 HBQ1P09105 142 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 HOXD12P35452 270 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 UGT2B10P36537 528 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 DCAF7P61962 342 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 SPHARQ15513 63 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 CD226Q15762 336 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 TSTQ16762 297 aaKnown RBP15.27■□□□□ 0.04
CCDC40-201ENST00000269318 C3orf38Q5JPI3 329 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 THSD4Q6ZMP0 1018 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 SLCO6A1Q86UG4 719 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 CADM2Q8N3J6 435 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 LNX2Q8N448 690 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 OR52L1Q8NGH7 329 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 ART5Q96L15 291 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 OR6C1Q96RD1 312 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 RACGAP1Q9H0H5 632 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 OR51E2Q9H255 320 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 OSGIN1Q9UJX0 560 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 SEC16AO15027 2179 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 TECTAO75443 2155 aa15.27■□□□□ 0.04
CCDC40-201ENST00000269318 C2orf92A0A1B0GVN3 265 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 IRGMA1A4Y4 181 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 CCRL2O00421 344 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 UTS2O95399 124 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 SAGP10523 405 aaPredicted RBP15.27■□□□□ 0.03
CCDC40-201ENST00000269318 ETV5P41161 510 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 CLK1P49759 484 aaKnown RBP15.27■□□□□ 0.03
CCDC40-201ENST00000269318 ETV1P50549 477 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 BMXP51813 675 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 FHL1Q13642 323 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 TMEM44Q2T9K0 475 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 NXNL2Q5VZ03 156 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 SMARCD3Q6STE5 483 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 APOOLQ6UXV4 268 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 ZNF440Q8IYI8 595 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 ZNF527Q8NB42 609 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 OR1N1Q8NGS0 311 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 RFKQ969G6 155 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 ZHX1-C8orf76Q96EF9 292 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 PLEKHA8Q96JA3 519 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 CCDC74BQ96LY2 380 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 PLGRKTQ9HBL7 147 aa15.27■□□□□ 0.03
CCDC40-201ENST00000269318 ZBTB20Q9HC78 741 aaPredicted RBP15.27■□□□□ 0.03
CCDC40-201ENST00000269318 HINT3Q9NQE9 182 aaKnown RBP15.27■□□□□ 0.03
CCDC40-201ENST00000269318 TO15178 435 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 OIP5O43482 229 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 BMP7P18075 431 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 CDH11P55287 796 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 DGUOKQ16854 277 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 LANCL3Q6ZV70 420 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 BBS1Q8NFJ9 593 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 STT3BQ8TCJ2 826 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 VMP1Q96GC9 406 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 GAL3ST4Q96RP7 486 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 DCSTAMPQ9H295 470 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 OCEL1Q9H607 264 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 RPS6KB2Q9UBS0 482 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 ADAMTS9Q9P2N4 1935 aa15.26■□□□□ 0.03
CCDC40-201ENST00000269318 TRAV27A0A087WT01 109 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 A0A087WUJ7 227 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 HCN1O60741 890 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 APOL3O95236 402 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 ENDOUP21128 410 aaKnown RBP15.25■□□□□ 0.03
CCDC40-201ENST00000269318 HTR1FP30939 366 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 FOXL2P58012 376 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 SKP2Q13309 424 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 ZNF829Q3KNS6 432 aaPredicted RBP15.25■□□□□ 0.03
CCDC40-201ENST00000269318 SOWAHCQ53LP3 525 aaPredicted RBP15.25■□□□□ 0.03
CCDC40-201ENST00000269318 PWWP2BQ6NUJ5 590 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 LINC00299Q6ZSB3 139 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 ZNF441Q8N8Z8 693 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 DNAJA4Q8WW22 397 aaPredicted RBP15.25■□□□□ 0.03
CCDC40-201ENST00000269318 C3orf49Q96BT1 292 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 NECAB3Q96P71 396 aaPredicted RBP15.25■□□□□ 0.03
CCDC40-201ENST00000269318 SLC7A5P2Q9GIP4 190 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 NRSN2Q9GZP1 204 aa15.25■□□□□ 0.03
CCDC40-201ENST00000269318 SLIRPQ9GZT3 109 aaKnown RBP15.25■□□□□ 0.03
CCDC40-201ENST00000269318 WWTR1Q9GZV5 400 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms