RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 RAB3AP20336 220 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 DAP3P51398 398 aaKnown RBP7.34□□□□□ -1.24
USP3-201ENST00000268049 GDF10P55107 478 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 ST3GAL3Q11203 375 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 TARDBPQ13148 414 aaKnown RBP eCLIP7.34□□□□□ -1.24
USP3-201ENST00000268049 FXNQ16595 210 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 VHLLQ6RSH7 139 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 NXPE4Q6UWF7 544 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 SUSD1Q6UWL2 747 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 CHPT1Q8WUD6 406 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 S100A16Q96FQ6 103 aaKnown RBP7.34□□□□□ -1.24
USP3-201ENST00000268049 TMEM80Q96HE8 168 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 SLC22A12Q96S37 553 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 POLDIP3Q9BY77 421 aaKnown RBP7.34□□□□□ -1.24
USP3-201ENST00000268049 CDCP1Q9H5V8 836 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 POPDC3Q9HBV1 291 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 C19orf12Q9NSK7 152 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 OXSMQ9NWU1 459 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 GSKIPQ9P0R6 139 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.34□□□□□ -1.24
USP3-201ENST00000268049 MCM3APO60318 1980 aa7.34□□□□□ -1.24
USP3-201ENST00000268049 A0A0A6YYC8 382 aaPredicted RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 I3L1I5 382 aaPredicted RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 TSPAN15O95858 294 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 HCKP08631 526 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 CEACAM1P13688 526 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 GTF2F2P13984 249 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 FECHP22830 423 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 AK4P27144 223 aaPredicted RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 FASLGP48023 281 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 ZNF616Q08AN1 781 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 SLC5A12Q1EHB4 618 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 UBAP2Q5T6F2 1119 aaKnown RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 ANKRD22Q5VYY1 191 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 TIGD3Q6B0B8 471 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 SLC22A25Q6T423 547 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 CASTOR1Q8WTX7 329 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 TMIGD2Q96BF3 282 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 MAPKAP1Q9BPZ7 522 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 SDK1Q7Z5N4 2213 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 ATAD5Q96QE3 1844 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 A0A1W2PP18 115 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 RNASET2O00584 256 aaKnown RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 ADAM10O14672 748 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 VILLO15195 856 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 STK17BO94768 372 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 SPDEFO95238 335 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 STATHP02808 62 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 CAPN3P20807 821 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 FPR1P21462 350 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 ADPRHP54922 357 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 CDH11P55287 796 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 AVPI1Q5T686 147 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 LIPIQ6XZB0 460 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 ASRGL1Q7L266 308 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 PIWIL3Q7Z3Z3 882 aaKnown RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 C1orf52Q8N6N3 182 aaKnown RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 SAMD12Q8N8I0 201 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 OR52E1Q8NGJ3 308 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 OR4Q3Q8NH05 313 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 OR5P2Q8WZ92 322 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 OR52B2Q96RD2 323 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 TRIB1Q96RU8 372 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 OBP2BQ9NPH6 170 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 TRIM36Q9NQ86 728 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 C5orf67F2Z3F1 127 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 ALX3O95076 343 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 SBK2P0C263 348 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 EBLN1P0CF75 366 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 HMGA1P17096 107 aaKnown RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 NAA10P41227 235 aaPredicted RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 PIGFQ07326 219 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 RPE65Q16518 533 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 NKAIN1Q4KMZ8 207 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 C9orf152Q5JTZ5 239 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 POC1BQ8TC44 478 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 FCAMRQ8WWV6 532 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 RDH14Q9HBH5 336 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 SLC22A23A1A5C7 686 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 MEIOCA2RUB1 952 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 ZNF587BE7ETH6 402 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 CDX4O14627 284 aaPredicted RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 RAD51DO75771 328 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 JUNP05412 331 aaKnown RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 IDUAP35475 653 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 CSNK1A1P48729 337 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 ZNF460Q14592 562 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 PTCHD3Q3KNS1 767 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 SPATS1Q496A3 300 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 BCL2L15Q5TBC7 163 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 C5orf46Q6UWT4 87 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 OR6K6Q8NGW6 343 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 BIRC7Q96CA5 298 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 ZNF845Q96IR2 970 aaPredicted RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 OR51V1Q9H2C8 321 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 WSB2Q9NYS7 404 aaPredicted RBP7.33□□□□□ -1.24
USP3-201ENST00000268049 SLC7A7Q9UM01 511 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 CEPT1Q9Y6K0 416 aa7.33□□□□□ -1.24
USP3-201ENST00000268049 ANKRD61A6NGH8 418 aa7.32□□□□□ -1.24
USP3-201ENST00000268049 C21orf140B9A014 251 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms