RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 HRNRQ86YZ3 2850 aaPredicted RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 ZNF469Q96JG9 3925 aaPredicted RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 EXPH5Q8NEV8 1989 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 DUXAA6NLW8 204 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 GTPBP1O00178 669 aaKnown RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 RNASET2O00584 256 aaKnown RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 KLF4O43474 513 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 FCMRO60667 390 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 SCN2BO60939 215 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 NTN1O95631 604 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 AVPP01185 164 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 THBDP07204 575 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 TUBBP07437 444 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 MYZAPP0CAP1 466 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 PABPC4LP0CB38 370 aaKnown RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 DHRS4L1P0CG22 281 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 FAM157BP0CG42 384 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 PPP3CBP16298 524 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 SFTPDP35247 375 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 ABCE1P61221 599 aaKnown RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 RPS26P62854 115 aaKnown RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 MPP2Q14168 576 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 CHI3L2Q15782 390 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 PDCD2Q16342 344 aaPredicted RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 ACKR1Q16570 336 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 NDUFAF6Q330K2 333 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 KRTAP21-3Q3LHN1 58 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 KRT71Q3SY84 523 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 TMEM176BQ3YBM2 270 aaPredicted RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 SHEQ5VZ18 495 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 OR4F3Q6IEY1 312 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 BEND4Q6ZU67 534 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 CLECL1Q8IZS7 167 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 CLEC4FQ8N1N0 589 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 ZNF781Q8N8C0 355 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 OR8J2Q8NGG1 315 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 OR5D16Q8NGK9 328 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 OR5W2Q8NH69 310 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 ROBO4Q8WZ75 1007 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 PIGTQ969N2 578 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 ARSGQ96EG1 525 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 ZC3HAV1LQ96H79 300 aaKnown RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 MRGPRX4Q96LA9 322 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 SDF2Q99470 211 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 PIP5K1AQ99755 562 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 RSRP1Q9BUV0 290 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 PARD6BQ9BYG5 372 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 SRXN1Q9BYN0 137 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 NMUR2Q9GZQ4 415 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 SERHL2Q9H4I8 314 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 TIGARQ9NQ88 270 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.68□□□□□ -1.02
VPS41-201ENST00000265745 KCNE5Q9UJ90 142 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 V9GYY5 206 aaPredicted RBP8.68□□□□□ -1.02
VPS41-201ENST00000265745 ARHGAP21Q5T5U3 1957 aa8.68□□□□□ -1.02
VPS41-201ENST00000265745 PRSS51A0A1B0GVH4 220 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 TMEM238LA0A1B0GVL6 79 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 GJE1A6NN92 205 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 ETV2O00321 342 aaPredicted RBP8.67□□□□□ -1.02
VPS41-201ENST00000265745 ANKRD28O15084 1053 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 TM9SF1O15321 606 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 RGS16O15492 202 aaPredicted RBP8.67□□□□□ -1.02
VPS41-201ENST00000265745 ZNF264O43296 627 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 EIF4E2O60573 245 aaKnown RBP8.67□□□□□ -1.02
VPS41-201ENST00000265745 DNAJA2O60884 412 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 SNUPNO95149 360 aaKnown RBP8.67□□□□□ -1.02
VPS41-201ENST00000265745 NUDT14O95848 222 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 THBS1P07996 1170 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 PRKCAP17252 672 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 HOXB4P17483 251 aaPredicted RBP8.67□□□□□ -1.02
VPS41-201ENST00000265745 PSMB1P20618 241 aaKnown RBP8.67□□□□□ -1.02
VPS41-201ENST00000265745 FPR1P21462 350 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 MATN1P21941 496 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 AGTR1P30556 359 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 RPL14P50914 215 aaKnown RBP8.67□□□□□ -1.02
VPS41-201ENST00000265745 PHC1P78364 1004 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 ZNF141Q15928 474 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 ZNF239Q16600 458 aaKnown RBP8.67□□□□□ -1.02
VPS41-201ENST00000265745 TNFAIP8L3Q5GJ75 292 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 SLC25A53Q5H9E4 307 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 PDZK1Q5T2W1 519 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 AP1ARQ63HQ0 302 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 LRRC75A-AS1Q8N1F1 130 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 ZNF614Q8N883 585 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 MIPOL1Q8TD10 442 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 RNF128Q8TEB7 428 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 ABHD3Q8WU67 409 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 CPNE4Q96A23 557 aaPredicted RBP8.67□□□□□ -1.02
VPS41-201ENST00000265745 PPP1R36Q96LQ0 422 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 SORT1Q99523 831 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 OR10A4Q9H209 315 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 LIN7BQ9HAP6 207 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 GP6Q9HCN6 339 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 FANCFQ9NPI8 374 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 HAO1Q9UJM8 370 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 PCDHGB4Q9UN71 923 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 GPR52Q9Y2T5 361 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 RAP2CQ9Y3L5 183 aa8.67□□□□□ -1.02
VPS41-201ENST00000265745 UQCRHLA0A096LP55 91 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 RNF103-CHMP3A0A140T963 221 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms