RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 ANKRD28O15084 1053 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 SEC14L2O76054 403 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 MPIG6BO95866 241 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 PTHP01270 115 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 HRGP04196 525 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 HBQ1P09105 142 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 AKAIN1P0CW23 69 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 ZNF14P17017 642 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 JUNBP17275 347 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 GABRA5P31644 462 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 EIF2DP41214 584 aaKnown RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 RPS5P46782 204 aaKnown RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 CTBSQ01459 385 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 RSU1Q15404 277 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 XKR7Q5GH72 579 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 SYT6Q5T7P8 510 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 EEF1A1P5Q5VTE0 462 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 TMEM184AQ6ZMB5 413 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 CYP4V2Q6ZWL3 525 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 NRARPQ7Z6K4 114 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 SERPINA12Q8IW75 414 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 UHRF1Q96T88 793 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 MFFQ9GZY8 342 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 HHLA2Q9UM44 414 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 ZNF337Q9Y3M9 751 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 TRAV27A0A087WT01 109 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 GABRPO00591 440 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 GOSR2O14653 212 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 AIFM1O95831 613 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 F3P13726 295 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 GIFP27352 417 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 HOXD12P35452 270 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 XCR1P46094 333 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 DAP3P51398 398 aaKnown RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 CSNK2A1P68400 391 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 EXOSC7Q15024 291 aaKnown RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 TMEM207Q6UWW9 146 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 ZNF852Q6ZMS4 543 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 RFLNAQ6ZTI6 216 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 CSNK2A3Q8NEV1 391 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 SNAPC3Q92966 411 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 TOX2Q96NM4 488 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 SLC22A12Q96S37 553 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 MYADMQ96S97 322 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 VRK1Q99986 396 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 RTP3Q9BQQ7 232 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 INIPQ9NRY2 104 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 ASIC5Q9NY37 505 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 SLC6A5Q9Y345 797 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 SCN7AQ01118 1682 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 TVP23AA6NH52 213 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 F11P03951 625 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 P04436 131 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 ADARB1P78563 741 aaKnown RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 PLK5Q496M5 336 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 FAM26DQ5JW98 314 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 SYNPRQ8TBG9 265 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 INSM2Q96T92 566 aaPredicted RBP10.07□□□□□ -0.8
CD44-201ENST00000263398 PBDC1Q9BVG4 233 aa10.07□□□□□ -0.8
CD44-201ENST00000263398 RAB40ALP0C0E4 278 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 SLC2A5P22732 501 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 CDK2P24941 298 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 FBXO46Q6PJ61 603 aaPredicted RBP10.06□□□□□ -0.8
CD44-201ENST00000263398 LINC00299Q6ZSB3 139 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 CLDN22Q8N7P3 220 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 ZNF740Q8NDX6 193 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 RAB40AQ8WXH6 277 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 TEX37Q96LM6 180 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 ADOQ96SZ5 270 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 EGLN3Q9H6Z9 239 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 ZNF175Q9Y473 711 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 NHSQ6T4R5 1651 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 PRSS38A1L453 326 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 A6NIN4 97 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 SCG5P05408 212 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 SLC1A3P43003 542 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 TAS2R31P59538 309 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 RAB5BP61020 215 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 GPR50Q13585 617 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 MRPL2Q5T653 305 aaKnown RBP10.06□□□□□ -0.8
CD44-201ENST00000263398 MYLIPQ8WY64 445 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 OR2M2Q96R28 347 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 FN3KQ9H479 309 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 EPHX3Q9H6B9 360 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 TMEM38AQ9H6F2 299 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 UBQLN4Q9NRR5 601 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 FAM86C1Q9NVL1 165 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 ZNF226Q9NYT6 803 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 KCNS2Q9ULS6 477 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 F5P12259 2224 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 CIB4A0PJX0 185 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 A8MVJ9 347 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 SYT5O00445 386 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 SEC14L5O43304 696 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 RAD1O60671 282 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 ALDOBP05062 364 aa10.06□□□□□ -0.8
CD44-201ENST00000263398 DCNP07585 359 aaKnown RBP10.06□□□□□ -0.8
CD44-201ENST00000263398 ARF3P61204 181 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms