RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PROX2Q3B8N5 592 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 SLC22A6Q4U2R8 563 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 DESI1Q6ICB0 168 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 LCN10Q6JVE6 187 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 VHLLQ6RSH7 139 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 C3P1Q6ZMU1 363 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 FAM57BQ71RH2 274 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 GPR149Q86SP6 731 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF480Q8WV37 535 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 MED20Q9H944 212 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 PISDQ9UG56 409 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 OR14J1Q9UGF5 321 aa11.34□□□□□ -0.59
COL8A1-201ENST00000261037 TESQ9UGI8 421 aaKnown RBP11.34□□□□□ -0.59
COL8A1-201ENST00000261037 DNAJC25-GNG10A0A024R161 153 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 HIDE1A8MVS5 230 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ALDH3B2P48448 385 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 MGAT3Q09327 533 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 SPRED3Q2MJR0 410 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 CMTM1Q8IZ96 169 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 POC1BQ8TC44 478 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ZFAND2BQ8WV99 257 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ATOH1Q92858 354 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 EGLN2Q96KS0 407 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 CDCA3Q99618 268 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ANKRD60Q9BZ19 345 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ENKD1Q9H0I2 346 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 OR52D1Q9H346 318 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 OBP2BQ9NPH6 170 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 USP22Q9UPT9 525 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 HHLA1C9JL84 531 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 HSPB6O14558 160 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 PRKRAO75569 313 aaKnown RBP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 AKAIN1P0CW23 69 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 GAB1Q13480 694 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 OR4F15Q8NGB8 312 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 PFDN5Q99471 154 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 PCDHGA1Q9Y5H4 931 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF736B4DX44 427 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF254O75437 659 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 TSPAN15O95858 294 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 HLA-DMAP28067 261 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 BDKRB2P30411 391 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 BCL2A1Q16548 175 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 FAM78AQ5JUQ0 283 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 SERPINA11Q86U17 422 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 LKAAEAR1Q8TD35 194 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 THAP7Q9BT49 309 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ULBP3Q9BZM4 244 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 GCM1Q9NP62 436 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 LHX3Q9UBR4 397 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 SLC35A3Q9Y2D2 325 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 BCAS1O75363 584 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 CPMP14384 443 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 HLA-FP30511 346 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 CAV3P56539 151 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 POU3F1Q03052 451 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 TDGQ13569 410 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 RPE65Q16518 533 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 CYP4V2Q6ZWL3 525 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 HSD17B8Q92506 261 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ELMOD3Q96FG2 381 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 DCBLD2Q96PD2 775 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 C1QTNF2Q9BXJ5 285 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 QRSL1Q9H0R6 528 aaKnown RBP11.33□□□□□ -0.6
COL8A1-201ENST00000261037 FAM53CQ9NYF3 392 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ENPP5Q9UJA9 477 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF337Q9Y3M9 751 aa11.33□□□□□ -0.6
COL8A1-201ENST00000261037 OR6C6A6NF89 314 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 F8W036 122 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 G3V3Y1 287 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 UPK1BO75841 260 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 PAHP00439 452 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 APEHP13798 732 aaKnown RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CXCL12P48061 93 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 PRLHRP49683 370 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 RAB5BP61020 215 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 BLOC1S1P78537 153 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CPXM2Q8N436 756 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ADAMTS16Q8TE57 1224 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 GDE1Q9NZC3 331 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 PCDHB10Q9UN67 800 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CD300LBA8K4G0 201 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 AIFM1O95831 613 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 HOXD9P28356 352 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 GK3PQ14409 553 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CNN3Q15417 329 aaKnown RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF674Q2M3X9 581 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CGB2Q6NT52 195 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 PGM2L1Q6PCE3 622 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 Q6ZPB1 254 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 DCP2Q8IU60 420 aaKnown RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF417Q8TAU3 575 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 BTBD2Q9BX70 525 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 SLC6A17Q9H1V8 727 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 TSPAN10Q9H1Z9 355 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CLMPQ9H6B4 373 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ACKR4Q9NPB9 350 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CUTCQ9NTM9 273 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms