RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 KEAP1Q14145 624 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CYBRD1Q53TN4 286 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 NCR3LG1Q68D85 454 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CHADLQ6NUI6 762 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CSNK2A3Q8NEV1 391 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 OR4N2Q8NGD1 307 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CPT1CQ8TCG5 803 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 SGCZQ96LD1 299 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CXorf58Q96LI9 332 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF582Q96NG8 517 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 SRMSQ9H3Y6 488 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF395Q9H8N7 513 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 FBXO7Q9Y3I1 522 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 GPR45Q9Y5Y3 372 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 COL1A2P08123 1366 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 A0A1W2PPH5 198 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 GXYLT2A0PJZ3 443 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TMEM238C9JI98 176 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 RAB29O14966 203 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 AZIN1O14977 448 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 PCDH8O95206 1070 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 MGMTP16455 207 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 LASP1Q14847 261 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF585AQ6P3V2 769 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TRIM40Q6P9F5 258 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 GLB1LQ6UWU2 654 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 HTR3DQ70Z44 454 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 LDB1Q86U70 411 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 KCNRGQ8N5I3 272 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TCTEX1D1Q8N7M0 179 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 RELL2Q8NC24 303 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 OR4F6Q8NGB9 312 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 MITD1Q8WV92 249 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 SCGB3A2Q96PL1 93 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TBL1XR1Q9BZK7 514 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 GSX1Q9H4S2 264 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 MYNNQ9NPC7 610 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TMEM184BQ9Y519 407 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 A0A087WZ62 844 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 NFKBIEO00221 500 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 UTS2O95399 124 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CHRNB4P30926 498 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 PSEN2P49810 448 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ART1P52961 327 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ARF6P62330 175 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 IL13RA1P78552 427 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 PLCXD3Q63HM9 321 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ABI3BPQ7Z7G0 1075 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 KCNMB4Q86W47 210 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 LNX1Q8TBB1 728 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 BORCS7Q96B45 105 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CHFRQ96EP1 664 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 S100A16Q96FQ6 103 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 HHIPL1Q96JK4 782 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF583Q96ND8 569 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 FDXACB1Q9BRP7 624 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CERS4Q9HA82 394 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF701Q9NV72 531 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 MED9Q9NWA0 146 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TJP1Q07157 1748 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ABCA3Q99758 1704 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 LEFTY2O00292 366 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 HEXAP06865 529 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 EPHA1P21709 976 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PCBP4P57723 403 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PLP1P60201 277 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 TRA2BP62995 288 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 MBLAC2Q68D91 279 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 LRRC55Q6ZSA7 311 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 KCTD9Q7L273 389 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF433Q8N7K0 673 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 IL31RAQ8NI17 732 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 CDS1Q92903 461 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 UCN3Q969E3 161 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PSMG2Q969U7 264 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SENP8Q96LD8 212 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 OR2A14Q96R47 310 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 OR5M11Q96RB7 305 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 NIPSNAP3BQ9BS92 247 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 C20orf24Q9BUV8 137 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 TKTL2Q9H0I9 626 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SEMA4GQ9NTN9 838 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 EPHA6Q9UF33 1036 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PCDHA9Q9Y5H5 950 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 A6NJY4 79 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 DUXAA6NLW8 204 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ARNTLO00327 626 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 AOC2O75106 756 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SLURP2P0DP57 97 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 TNFSF4P23510 183 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 THPOP40225 353 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 CSNK1EP49674 416 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SOX10P56693 466 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 LCN6P62502 163 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 GINS1Q14691 196 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 B3GNTL1Q67FW5 361 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 STEAP4Q687X5 459 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SLC27A1Q6PCB7 646 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 IRF2BP2Q7Z5L9 587 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms