RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 DTX3Q8N9I9 347 aa17.74■□□□□ 0.43
PTPRE-201ENST00000254667 ZBTB8BQ8NAP8 495 aaPredicted RBP17.74■□□□□ 0.43
PTPRE-201ENST00000254667 ABHD11Q8NFV4 315 aa17.74■□□□□ 0.43
PTPRE-201ENST00000254667 PISDQ9UG56 409 aa17.74■□□□□ 0.43
PTPRE-201ENST00000254667 BCAS1O75363 584 aaPredicted RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 FURINP09958 794 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 CD79AP11912 226 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 ADH6P28332 368 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 CD34P28906 385 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 RACK1P63244 317 aaKnown RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 PTPRRQ15256 657 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 RRNAD1Q96FB5 475 aaKnown RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 CCNL2Q96S94 520 aaPredicted RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 ENKD1Q9H0I2 346 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 HHLA2Q9UM44 414 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 POLHQ9Y253 713 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 ANKRD36CQ5JPF3 1778 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 OR1D4P47884 311 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 HOXC5Q00444 222 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 MMP21Q8N119 569 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 ARL14Q8N4G2 192 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 RCBTB1Q8NDN9 531 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 CSNK2A3Q8NEV1 391 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 OR5D14Q8NGL3 314 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 ANKRD30BLA7E2S9 258 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 CRTAPO75718 401 aaPredicted RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 CSF1P09603 554 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 RPL34P49207 117 aaKnown RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 CSNK1EP49674 416 aaKnown RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 EEF1A1P68104 462 aaKnown RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 MRPL2Q5T653 305 aaKnown RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 RFLNAQ6ZTI6 216 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 CPNE5Q9HCH3 593 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 ACP2P11117 423 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 CD46P15529 392 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 DCDP81605 110 aaKnown RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 COL9A2Q14055 689 aaPredicted RBP17.73■□□□□ 0.43
PTPRE-201ENST00000254667 HCAR1Q9BXC0 346 aa17.73■□□□□ 0.43
PTPRE-201ENST00000254667 TLCD2A6NGC4 264 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 FBP2O00757 339 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 CTHP32929 405 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 GPR50Q13585 617 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 PPA1Q15181 289 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 TBCEQ15813 527 aaPredicted RBP17.72■□□□□ 0.43
PTPRE-201ENST00000254667 AFMIDQ63HM1 303 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 BORAQ6PGQ7 559 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 ZNF322Q6U7Q0 402 aaPredicted RBP17.72■□□□□ 0.43
PTPRE-201ENST00000254667 CCDC86Q9H6F5 360 aaKnown RBP17.72■□□□□ 0.43
PTPRE-201ENST00000254667 SLC16A7O60669 478 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 AKR1C4P17516 323 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 S100A2P29034 98 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 ACSM3Q53FZ2 586 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 ASB16Q96NS5 453 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 OR2B2Q9GZK3 357 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 TEX10Q9NXF1 929 aaPredicted RBP17.72■□□□□ 0.43
PTPRE-201ENST00000254667 ITGB4P16144 1822 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 H3BMQ9 156 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 ATF4P18848 351 aaPredicted RBP17.72■□□□□ 0.43
PTPRE-201ENST00000254667 CD27P26842 260 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 CHRNEQ04844 493 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 WDR53Q7Z5U6 358 aaPredicted RBP17.72■□□□□ 0.43
PTPRE-201ENST00000254667 ELMOD2Q8IZ81 293 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 COG8Q96MW5 612 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 ULBP3Q9BZM4 244 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 NT5DC2Q9H857 520 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 TMEM165Q9HC07 324 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 WDR37Q9Y2I8 494 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 PCDHGA8Q9Y5G5 932 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 TRAV27A0A087WT01 109 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 TACR1P25103 407 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 LSSP48449 732 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 PTH2RP49190 550 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 TAS2R31P59538 309 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 CYCSP99999 105 aaKnown RBP17.72■□□□□ 0.43
PTPRE-201ENST00000254667 HENMT1Q5T8I9 393 aaKnown RBP17.72■□□□□ 0.43
PTPRE-201ENST00000254667 SFRP4Q6FHJ7 346 aaPredicted RBP17.72■□□□□ 0.43
PTPRE-201ENST00000254667 OR5L1Q8NGL2 311 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 BABAM2Q9NXR7 383 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 PCDHGA6Q9Y5G7 932 aa17.72■□□□□ 0.43
PTPRE-201ENST00000254667 A8MV72 311 aaPredicted RBP17.71■□□□□ 0.43
PTPRE-201ENST00000254667 LYRM1O43325 122 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 MPIG6BO95866 241 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 DUSP6Q16828 381 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 IGFN1Q86VF2 1251 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 LRRC56Q8IYG6 542 aaPredicted RBP17.71■□□□□ 0.43
PTPRE-201ENST00000254667 ASCC1Q8N9N2 400 aaKnown RBP17.71■□□□□ 0.43
PTPRE-201ENST00000254667 SLC6A20Q9NP91 592 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 IFNA1P01562 189 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 SERPINA5P05154 406 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 PTGER1P34995 402 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 GIPRP48546 466 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 ZP2Q05996 745 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 GPR18Q14330 331 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 RTL6Q6ICC9 239 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 FAM217AQ8IXS0 508 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 KIR3DX1Q9H7L2 352 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 A6NL46 340 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 PKLRP30613 574 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 AKR1C2P52895 323 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 MLLT11Q13015 90 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms