RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PFN4Q8NHR9 129 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 PLA2G12AQ9BZM1 189 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 DUSP21Q9H596 190 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 EGLN3Q9H6Z9 239 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 KRCC1Q9NPI7 259 aaPredicted RBP13.94□□□□□ -0.18
HDHD3-201ENST00000238379 MEPEQ9NQ76 525 aaPredicted RBP13.94□□□□□ -0.18
HDHD3-201ENST00000238379 C20orf141Q9NUB4 165 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 IMPAD1Q9NX62 359 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 FOXJ2Q9P0K8 574 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 CFAP54Q96N23 3096 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 MUC6Q6W4X9 2439 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 A0A1W2PQ72 361 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 M0R129 80 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 ADAM10O14672 748 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 DKK1O94907 266 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 HTR1AP08908 422 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 RAB40ALP0C0E4 278 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 NAGAP17050 411 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 RBM34P42696 430 aaKnown RBP13.93□□□□□ -0.18
HDHD3-201ENST00000238379 TEKQ02763 1124 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 BTBD16Q32M84 506 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 TMEM164Q5U3C3 297 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 BROXQ5VW32 411 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 FOXB2Q5VYV0 432 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 DEFB124Q8NES8 71 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 WDR36Q8NI36 951 aaKnown RBP13.93□□□□□ -0.18
HDHD3-201ENST00000238379 CT55Q8WUE5 264 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 LAT2Q9GZY6 243 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 ATP13A2Q9NQ11 1180 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 MYOTQ9UBF9 498 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 RPS6KB2Q9UBS0 482 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 MED31Q9Y3C7 131 aa13.93□□□□□ -0.18
HDHD3-201ENST00000238379 PTGES3LE9PB15 166 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 NDUFB5O43674 189 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 FOXD2O60548 495 aaPredicted RBP13.92□□□□□ -0.18
HDHD3-201ENST00000238379 IFI30P13284 250 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 TCN2P20062 427 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 MAKP20794 623 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 CTBP2P56545 445 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 COPZ1P61923 177 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 CSNK2BP67870 215 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 SLC35A2P78381 396 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 ZNF117Q03924 483 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 EFR3AQ14156 821 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 GINS1Q14691 196 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 C3orf38Q5JPI3 329 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 TMPRSS11FQ6ZWK6 438 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 IQCF1Q8N6M8 205 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 OR11G2Q8NGC1 345 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 OR8D4Q8NGM9 314 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 DNAJA4Q8WW22 397 aaPredicted RBP13.92□□□□□ -0.18
HDHD3-201ENST00000238379 C3orf49Q96BT1 292 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 KLHDC3Q9BQ90 382 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 DEFB126Q9BYW3 111 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 TBL1XR1Q9BZK7 514 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 SLC25A19Q9HC21 320 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 PLCXD1Q9NUJ7 323 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 SCN3BQ9NY72 215 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 IL20Q9NYY1 176 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 TCFL5Q9UL49 500 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 TPRKBQ9Y3C4 175 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 C17orf51A8MQB3 221 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 KPNA4O00629 521 aaPredicted RBP13.92□□□□□ -0.18
HDHD3-201ENST00000238379 SOCS6O14544 535 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 MPZL2O60487 215 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 EIF4E2O60573 245 aaKnown RBP13.92□□□□□ -0.18
HDHD3-201ENST00000238379 IGHEP01854 428 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 MST1P26927 711 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 EVI2BP34910 448 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 FBXW4P57775 412 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 PIGFQ07326 219 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 EXT1Q16394 746 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 PLAG1Q6DJT9 500 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 WBP2NLQ6ICG8 309 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 ACSM5Q6NUN0 579 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 LYPD8Q6UX82 237 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 ZNF620Q6ZNG0 422 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 PTCHD4Q6ZW05 846 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 P3H2Q8IVL5 708 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 HGDQ93099 445 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 ZNF524Q96C55 264 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 BPIFA2Q96DR5 249 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 RHNO1Q9BSD3 238 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 FAM192AQ9GZU8 254 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 FARSAQ9Y285 508 aaKnown RBP13.92□□□□□ -0.18
HDHD3-201ENST00000238379 TMEM5Q9Y2B1 443 aa13.92□□□□□ -0.18
HDHD3-201ENST00000238379 SDK2Q58EX2 2172 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 ZNF292O60281 2723 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 A0A087WUJ7 227 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 HCRTR2O43614 444 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 ENDOUP21128 410 aaKnown RBP13.91□□□□□ -0.18
HDHD3-201ENST00000238379 CCR4P51679 360 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 RPS18P62269 152 aaKnown RBP13.91□□□□□ -0.18
HDHD3-201ENST00000238379 SNRPGP62308 76 aaKnown RBP13.91□□□□□ -0.18
HDHD3-201ENST00000238379 EFNB1P98172 346 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 CASP12Q6UXS9 341 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 KCTD8Q6ZWB6 473 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 MRGPREQ86SM8 312 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 SPARTQ8N0X7 666 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 TMCO5AQ8N6Q1 288 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms