RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PGCP20142 388 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 INAQ16352 499 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 RANBP3LQ86VV4 465 aaPredicted RBP24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 RSRC1Q96IZ7 334 aaKnown RBP24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 CTPS2Q9NRF8 586 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 MED17Q9NVC6 651 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 TFECO14948 347 aaPredicted RBP24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 TPST2O60704 377 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 IFNW1P05000 195 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 CELA3AP09093 270 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 UQCRBP14927 111 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 IDH2P48735 452 aaKnown RBP24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 DSCR4P56555 118 aaPredicted RBP24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 QPRTQ15274 297 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 HYAL4Q2M3T9 481 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 CADM2Q8N3J6 435 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 UBL7Q96S82 380 aaPredicted RBP24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 TSPAN10Q9H1Z9 355 aaPredicted RBP24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 TESQ9UGI8 421 aaKnown RBP24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 ANAPC2Q9UJX6 822 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 AURKCQ9UQB9 309 aa24.75■■□□□ 1.55
CHMP4B-201ENST00000217402 DHRS12A0PJE2 317 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 FAM47E-STBD1D6RA91 191 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 HTR2AP28223 471 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 KCNC4Q03721 635 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 ADGRG5Q8IZF4 528 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 MCHR1Q99705 422 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 UGT2B28Q9BY64 529 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 AMBRA1Q9C0C7 1298 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 DENND2DQ9H6A0 471 aaPredicted RBP24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 EVA1AQ9H8M9 152 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 TAS2R10Q9NYW0 307 aa24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 RPH3AQ9Y2J0 694 aaPredicted RBP24.74■■□□□ 1.55
CHMP4B-201ENST00000217402 TCRBV3S1A0A5B6 114 aa24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 hCG_2039718K7EN88 272 aa24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 HK1P19367 917 aa24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 SRD5A2P31213 254 aa24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 COPZ1P61923 177 aa24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 GANABQ14697 944 aaKnown RBP24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 YRDCQ86U90 279 aaKnown RBP24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 FAM109AQ8N4B1 249 aa24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 CANT1Q8WVQ1 401 aa24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 HEATR5AQ86XA9 2040 aa24.73■■□□□ 1.55
CHMP4B-201ENST00000217402 CPSF4LA6NMK7 179 aaKnown RBP24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 SHISA8B8ZZ34 492 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 MT-ND1P03886 318 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 SEMG1P04279 462 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 PSMA4P25789 261 aaKnown RBP24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 YAP1P46937 504 aaKnown RBP24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 ACTR3P61158 418 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 FOXK1P85037 733 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 VLDLRP98155 873 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 PLPPR5Q32ZL2 321 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 FAM98BQ52LJ0 330 aaKnown RBP24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 FAM180AQ6UWF9 173 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 LSRQ86X29 649 aaPredicted RBP24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 FAM83FQ8NEG4 500 aaPredicted RBP24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 OR5M1Q8NGP8 315 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 OR14L1PQ8NHC6 308 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 NPAS1Q99742 590 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 ZNF559Q9BR84 538 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 NCKAP5O14513 1909 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 PCNX3Q9H6A9 2034 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 MST1P26927 711 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 SESN3P58005 492 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 ALDH6A1Q02252 535 aaKnown RBP24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 CHRNB3Q05901 458 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 CISD2Q8N5K1 135 aaKnown RBP24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 DEFB127Q9H1M4 99 aa24.72■■□□□ 1.55
CHMP4B-201ENST00000217402 FAAHO00519 579 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 ATXN7O15265 892 aaPredicted RBP24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 WISP1O95388 367 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 GPIP06744 558 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 PRKCAP17252 672 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 FOXF1Q12946 379 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 NFATC3Q12968 1075 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 WIPI1Q5MNZ9 446 aaPredicted RBP24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 ENTPD8Q5MY95 495 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 RAET1LQ5VY80 246 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 PLEKHM3Q6ZWE6 761 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 TSPYL5Q86VY4 417 aaPredicted RBP24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 POP5Q969H6 163 aaKnown RBP24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 DTNBP1Q96EV8 351 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 C7orf34Q96L11 122 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 TRIM2Q9C040 744 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 MAGIXQ9H6Y5 334 aa24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 SPENQ96T58 3664 aaKnown RBP24.71■■□□□ 1.55
CHMP4B-201ENST00000217402 A0A087WZY1 265 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 J3KTA2 159 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 ZIC3O60481 467 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 SEMA7AO75326 666 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 FABP3P05413 133 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 HPNP05981 417 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 UMPSP11172 480 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 GP1BBP13224 206 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 OR1Q1Q15612 314 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 PRR30Q53SZ7 412 aaPredicted RBP24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 WBP2NLQ6ICG8 309 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 TSEN54Q7Z6J9 526 aaKnown RBP24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 ZDHHC21Q8IVQ6 265 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms