RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 DDAH2O95865 285 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 ATXN8OSP0DMR3 200 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 SAGP10523 405 aaPredicted RBP27.32■■□□□ 1.96
PABPN1-201ENST00000216727 CALRP27797 417 aaKnown RBP27.32■■□□□ 1.96
PABPN1-201ENST00000216727 SOX3P41225 446 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 C16orf87Q6PH81 154 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 GATAD2AQ86YP4 633 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 OR13C2Q8NGS9 318 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 OR4C6Q8NH72 309 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 FNDC8Q8TC99 324 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 SLC2A12Q8TD20 617 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 ZNF721Q8TF20 911 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 DPYSL5Q9BPU6 564 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 OR8D2Q9GZM6 311 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 HINT3Q9NQE9 182 aaKnown RBP27.32■■□□□ 1.96
PABPN1-201ENST00000216727 NDUFB11Q9NX14 153 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 RPS6KB2Q9UBS0 482 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 SLC2A10O95528 541 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 IDUAP35475 653 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 WNT4P56705 351 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 ZNF404Q494X3 552 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 ARHGAP40Q5TG30 622 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 KIRREL2Q6UWL6 708 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 SLC43A2Q8N370 569 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 FAM71CQ8NEG0 241 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 MCFD2Q8NI22 146 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 SAP25Q8TEE9 199 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 UBQLN4Q9NRR5 601 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 SEC14L4Q9UDX3 406 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 EXOGQ9Y2C4 368 aaKnown RBP27.31■■□□□ 1.96
PABPN1-201ENST00000216727 CARD8Q9Y2G2 431 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 ADAMTS20P59510 1910 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 FRG2CA6NGY1 282 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 METTL15A6NJ78 407 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 J3QRK9 145 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 EFNA3P52797 238 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 NR0B2Q15466 257 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 EFHD2Q96C19 240 aaPredicted RBP27.31■■□□□ 1.96
PABPN1-201ENST00000216727 CLIP3Q96DZ5 547 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 LCORQ96JN0 433 aaPredicted RBP27.31■■□□□ 1.96
PABPN1-201ENST00000216727 NXF2Q9GZY0 626 aaKnown RBP27.31■■□□□ 1.96
PABPN1-201ENST00000216727 ENKD1Q9H0I2 346 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 NXF5Q9H1B4 397 aaKnown RBP27.31■■□□□ 1.96
PABPN1-201ENST00000216727 RNF167Q9H6Y7 350 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 ISYNA1Q9NPH2 558 aa27.31■■□□□ 1.96
PABPN1-201ENST00000216727 MKKSQ9NPJ1 570 aaPredicted RBP27.31■■□□□ 1.96
PABPN1-201ENST00000216727 TNRC6BQ9UPQ9 1833 aaKnown RBP27.3■■□□□ 1.96
PABPN1-201ENST00000216727 A8MUA0 341 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 GPX5O75715 221 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 PSMA1P25786 263 aaKnown RBP27.3■■□□□ 1.96
PABPN1-201ENST00000216727 VWA2Q5GFL6 755 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 CXXC5Q7LFL8 322 aaKnown RBP27.3■■□□□ 1.96
PABPN1-201ENST00000216727 CPOQ8IVL8 374 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 GID4Q8IVV7 300 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 CADM2Q8N3J6 435 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 ZNF527Q8NB42 609 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 OR9Q1Q8NGQ5 310 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 DNAJA4Q8WW22 397 aaPredicted RBP27.3■■□□□ 1.96
PABPN1-201ENST00000216727 ADIPOR1Q96A54 375 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 HSPBAP1Q96EW2 488 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 LMF1Q96S06 567 aa27.3■■□□□ 1.96
PABPN1-201ENST00000216727 H2AFY2Q9P0M6 372 aaPredicted RBP27.3■■□□□ 1.96
PABPN1-201ENST00000216727 NGFRP08138 427 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 GPR143P51810 404 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 DCAF7P61962 342 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 FNDC7Q5VTL7 733 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 THSD4Q6ZMP0 1018 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 ART5Q96L15 291 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 MRTO4Q9UKD2 239 aaKnown RBP27.29■■□□□ 1.96
PABPN1-201ENST00000216727 SRPK3Q9UPE1 567 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 APOL3O95236 402 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 ANKRD34CP0C6C1 535 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 LIMS3P0CW19 117 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 LIMS4P0CW20 117 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 RPS3AP61247 264 aaKnown RBP27.29■■□□□ 1.96
PABPN1-201ENST00000216727 NSDHLQ15738 373 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 ZNF574Q6ZN55 896 aaPredicted RBP27.29■■□□□ 1.96
PABPN1-201ENST00000216727 PHC2Q8IXK0 858 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 TMCO5AQ8N6Q1 288 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 BBS1Q8NFJ9 593 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 OR14A16Q8NHC5 309 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 DAZLQ92904 295 aaKnown RBP27.29■■□□□ 1.96
PABPN1-201ENST00000216727 CMC2Q9NRP2 79 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 BAIAP2Q9UQB8 552 aa27.29■■□□□ 1.96
PABPN1-201ENST00000216727 LY6G6EA0A0G2JKS1 128 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 FAM86C2PA6NEL3 165 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 CPEP16870 476 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 COPZ1P61923 177 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 NDUFAF6Q330K2 333 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 C1orf189Q5VU69 101 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 TMPRSS9Q7Z410 1059 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 MFSD4AQ8N468 514 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 JAM3Q9BX67 310 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 STUB1Q9UNE7 303 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 U3KQA8 63 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 SYNDIG1LA6NDD5 238 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 FOXK2Q01167 660 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 GUSBP11Q6P575 273 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 RTL4Q6ZR62 310 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 OAFQ86UD1 273 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms