RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ACBD7Q8N6N7 88 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 LSMEM1Q8N8F7 131 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 C16orf52Q8NHV5 167 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 TM9SF4Q92544 642 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SLC25A46Q96AG3 418 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 COQ7Q99807 217 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 JAM3Q9BX67 310 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 RAB33BQ9H082 229 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 CPNE5Q9HCH3 593 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 MKKSQ9NPJ1 570 aaPredicted RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 POLE4Q9NR33 117 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 ERVK13-1Q9NX77 482 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SIGLEC7Q9Y286 467 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 DTX4Q9Y2E6 619 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 PCDHGB6Q9Y5F9 930 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 EYSQ5T1H1 3165 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SPAG17Q6Q759 2223 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 FITM1A5D6W6 292 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 EFCAB7A8K855 629 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 C17orf105B2RV13 164 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 HRKO00198 91 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 PLD2O14939 933 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 POLR1CO15160 346 aaPredicted RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 DUX1O43812 170 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 OR2B3O76000 313 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 DLGAP3O95886 979 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 PTTG1O95997 202 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 APOA1P02647 267 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 HLA-DPB1P04440 258 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 HPGDP15428 266 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 FUT1P19526 365 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 TBXA2RP21731 343 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CD1CP29017 333 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 GALNSP34059 522 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 GABRA4P48169 554 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SLC9A3P48764 834 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SEPHS1P49903 392 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 PLAURQ03405 335 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CRYZQ08257 329 aaKnown RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 FUT7Q11130 342 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SRSF5Q13243 272 aaKnown RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 STEAP3Q658P3 488 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF440Q8IYI8 595 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SIRT6Q8N6T7 355 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF527Q8NB42 609 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 RCBTB1Q8NDN9 531 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 OR7G1Q8NGA0 311 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SPRYD4Q8WW59 207 aaPredicted RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 MVB12AQ96EY5 273 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CHRDQ9H2X0 955 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 TPK1Q9H3S4 243 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 INPP5EQ9NRR6 644 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CUTCQ9NTM9 273 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 FLRT3Q9NZU0 649 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SLC35A3Q9Y2D2 325 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CAB39Q9Y376 341 aaPredicted RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CMAHPQ9Y471 501 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 MMACHCQ9Y4U1 282 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 THADAQ6YHU6 1953 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SERINC4A6NH21 518 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 C12orf71A8MTZ7 269 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CTDSP2O14595 271 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CASKO14936 926 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 PIAS2O75928 621 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SNX4O95219 450 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CT45A8P0DMV1 189 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CT45A9P0DMV2 189 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 SPTBP11277 2137 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 HK1P19367 917 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 GTF2E2P29084 291 aaKnown RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ACAA2P42765 397 aaKnown RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 FXYD6P3P58550 94 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 PSPHP78330 225 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 FOXK2Q01167 660 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 BDH1Q02338 343 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ACSM1Q08AH1 577 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CT45A2Q5DJT8 189 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 DDI2Q5TDH0 399 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 NKAIN2Q5VXU1 208 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 OGFOD3Q6PK18 319 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF322Q6U7Q0 402 aaPredicted RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 RTL4Q6ZR62 310 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 TTLL10Q6ZVT0 673 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 PLXDC1Q8IUK5 500 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CARFQ8N187 725 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 CAMKK1Q8N5S9 505 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 BCORP1Q8N888 145 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ZFP41Q8N8Y5 198 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ATP6V1C2Q8NEY4 427 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 OR10H4Q8NGA5 316 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 OR51A7Q8NH64 312 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 DNAJA4Q8WW22 397 aaPredicted RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ARSGQ96EG1 525 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 TM9SF2Q99805 663 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 MED18Q9BUE0 208 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF426Q9BUY5 554 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 ALG8Q9BVK2 526 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 TMED9Q9BVK6 235 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 BARHL1Q9BZE3 327 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms