RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SPNS1Q9H2V7 528 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 TXNL4BQ9NX01 149 aaKnown RBP11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 A0A1W2PP55 124 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 C1orf226A1L170 272 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 EMC8O43402 210 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 HTR3BO95264 441 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 TIMP2P16035 220 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 S100A11P31949 105 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 SERPINF1P36955 418 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 DLSTP36957 453 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 PPT1P50897 306 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 MAP2K6P52564 334 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 LEXMQ3ZCV2 418 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 OR52P1PQ8NH57 321 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 DOK4Q8TEW6 326 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 RAB7BQ96AH8 199 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 SLC25A37Q9NYZ2 338 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 KLK4Q9Y5K2 254 aa11.38□□□□□ -0.59
TSPAN9-201ENST00000011898 SMCO3A2RU48 225 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 TRAPPC13A5PLN9 417 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 H0YIV9 168 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 PRAF2O60831 178 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 MRPL3P09001 348 aaKnown RBP11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 C1SP09871 688 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 ADRB3P13945 408 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 HMGA1P17096 107 aaKnown RBP11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 HLA-DMAP28067 261 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 ADH6P28332 368 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 TAS2R38P59533 333 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 VAMP2P63027 116 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 ODF4Q2M2E3 257 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 RNF212Q495C1 297 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 OR4C11Q6IEV9 310 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 KLHDC8AQ8IYD2 350 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 ACBD7Q8N6N7 88 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 SGK3Q96BR1 496 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 AP1S3Q96PC3 154 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 GPATCH2Q9NW75 528 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 OR1A2Q9Y585 309 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 IL1AP01583 271 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 CFIP05156 583 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 SFTPBP07988 381 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 AHCYP23526 432 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 GPR4P46093 362 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 SORDQ00796 357 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 ZNF776Q68DI1 518 aaPredicted RBP11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 NAA40Q86UY6 237 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 PRSS58Q8IYP2 241 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 WDR77Q9BQA1 342 aaPredicted RBP11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 LGR4Q9BXB1 951 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 POTEKPQ9BYX7 375 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 HS3ST2Q9Y278 367 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 U3KQ87 197 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 RIF1Q5UIP0 2472 aaKnown RBP11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 IMPA1P29218 277 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 PTGER1P34995 402 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 ETV5P41161 510 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 WNT4P56705 351 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 SLC7A9P82251 487 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 HTR4Q13639 388 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 RBM39Q14498 530 aaKnown RBP11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 PDZD11Q5EBL8 140 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 DNAJC22Q8N4W6 341 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 FBXL6Q8N531 539 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 OR5D16Q8NGK9 328 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 OR2A12Q8NGT7 310 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 UBTD2Q8WUN7 234 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 MOAP1Q96BY2 351 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 ZNF354BQ96LW1 612 aa11.37□□□□□ -0.59
TSPAN9-201ENST00000011898 TCRBV5S2A0A599 114 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 C1orf105O95561 183 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 B3GALT4O96024 378 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 IGLV3-27P01718 113 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 ACSM4P0C7M7 580 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 RPS19P39019 145 aaKnown RBP11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 RNF144AP50876 292 aaPredicted RBP11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 RAB28P51157 221 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 EPHA5P54756 1037 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 SSTP61278 116 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 CTF1Q16619 201 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 CTU2Q2VPK5 515 aaKnown RBP11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 MLIPQ5VWP3 458 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 B3GLCTQ6Y288 498 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 GAREM2Q75VX8 874 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 TMEM200AQ86VY9 491 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 NLGN4XQ8N0W4 816 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 TEX19Q8NA77 164 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 ZNF740Q8NDX6 193 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 OR56B4Q8NH76 319 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 HRASLS5Q96KN8 279 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 GPER1Q99527 375 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 SPOCK3Q9BQ16 436 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 FN3KQ9H479 309 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 EMC7Q9NPA0 242 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 FRS3O43559 492 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 KLK8O60259 260 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 TSPAN12O95859 305 aa11.36□□□□□ -0.59
TSPAN9-201ENST00000011898 VASNQ6EMK4 673 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms