RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 PCGF3Q3KNV8 242 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 GGTA1PQ4G0N0 100 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 EEF1A1P5Q5VTE0 462 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PRSS35Q8N3Z0 413 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ZFPM2Q8WW38 1151 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CMTM3Q96MX0 182 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 KATNB1Q9BVA0 655 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 B3GNT5Q9BYG0 378 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 MFFQ9GZY8 342 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CHRDQ9H2X0 955 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CTPS2Q9NRF8 586 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 K7EPK0 472 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 LALBAP00709 142 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 INHBCP55103 352 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF674Q2M3X9 581 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 EARS2Q5JPH6 523 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SIAH1Q8IUQ4 282 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 FAM71E2Q8N5Q1 922 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR8J2Q8NGG1 315 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR6N2Q8NGY6 317 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 INTS12Q96CB8 462 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 RSPRY1Q96DX4 576 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 KCNG2Q9UJ96 466 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ANKRD30BLA7E2S9 258 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 INPPL1O15357 1258 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 MSI1O43347 362 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR2T7P0C7T2 308 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PYCR1P32322 319 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CAV2P51636 162 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 BTG1P62324 171 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 C3orf38Q5JPI3 329 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 GTF2H5Q6ZYL4 71 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR2T27Q8NH04 317 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR8K3Q8NH51 312 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SLC46A1Q96NT5 459 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 TRIB1Q96RU8 372 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SLC7A7Q9UM01 511 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 MED12LQ86YW9 2145 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PSME4Q14997 1843 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 LOC105369274A0A096LPK9 316 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 A0A0U1RQF3 1178 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 TPST2O60704 377 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 RAB3DO95716 219 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 DCNP07585 359 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 HLA-DOBP13765 273 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SORDQ00796 357 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ARL16Q0P5N6 197 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM115Q12893 351 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 TECRLQ5HYJ1 363 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 MS4A13Q5J8X5 152 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 OR4N4Q8N0Y3 316 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ACOT11Q8WXI4 607 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 UBXN10Q96LJ8 280 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 WDR92Q96MX6 357 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 C1QTNF2Q9BXJ5 285 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 FN3KRPQ9HA64 309 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ANKMY1Q9P2S6 941 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 FAM149AA5PLN7 773 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 DDAH2O95865 285 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CD1EP15812 388 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 PSMB3P49720 205 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CASP7P55210 303 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SLC35D3Q5M8T2 416 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 MCATQ8IVS2 390 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CPT1CQ8TCG5 803 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 HAS2Q92819 552 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 GAL3ST1Q99999 423 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 THAP7Q9BT49 309 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 NTMT1Q9BV86 223 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CDH20Q9HBT6 801 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF391Q9UJN7 358 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 NPFFR2Q9Y5X5 522 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CAMTA1Q9Y6Y1 1673 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 NAT2P11245 290 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 RAC1P63000 192 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CHRNA6Q15825 494 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 GPR155Q7Z3F1 870 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF546Q86UE3 836 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SLC51BQ86UW2 128 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZFP82Q8N141 532 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZCCHC10Q8TBK6 192 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF486Q96H40 463 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF281Q9Y2X9 895 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SDC3O75056 442 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CNOT4O95628 575 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 DOC2AQ14183 400 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SLC17A1Q14916 467 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 NCBP2-AS2Q69YL0 99 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 C1orf87Q8N0U7 546 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 PLPP5Q8NEB5 264 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 OR51L1Q8NGJ5 315 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 NPY6RQ99463 290 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ELOVL3Q9HB03 270 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CXorf51AA0A1B0GTR3 108 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CD300LBA8K4G0 201 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 H3BSA7 217 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 HPGDSO60760 199 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 MT-ATP6P00846 226 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 GCH1P30793 250 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 KLF1Q13351 362 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms