RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ccrl2O35457 360 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Mab21l1O70299 359 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 F9P16294 471 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Itgb7P26011 806 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Ucp3P56501 308 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Fxyd2Q04646 70 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Fam98aQ3TJZ6 515 aaKnown RBP12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Tfb2mQ3TL26 396 aaKnown RBP12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Tamm41Q3TUH1 337 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Xkr7Q5GH64 580 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Prg2Q61878 223 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Smarcd3Q6P9Z1 483 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Slc6a5Q761V0 799 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Olfr70Q80ZX9 316 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Banf2Q8BVR0 90 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Dusp15Q8R4V2 235 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Olfr881Q8VF63 314 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Olfr868Q8VFI8 309 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Q91W34 466 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Gid4Q9CPY6 217 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Txndc17Q9CQM5 123 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 4931417E11RikQ9CR05 305 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 MtpapQ9D0D3 585 aaKnown RBP12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Dmac2Q9D7K5 258 aaKnown RBP12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Deaf1Q9Z1T5 566 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 CN725425A0A087WRU1 652 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Gm7714E9Q079 131 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Aldh3b3J3QMK6 479 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Gm10338K7N692 204 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Bcl2a1dO55179 172 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Yme1l1O88967 715 aaKnown RBP12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Cdh11P55288 796 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Slc9a3r1P70441 355 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Crtc2Q3U182 692 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Ccser2Q3UHI0 833 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Ube2fbQ3UWQ3 185 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Cxcl17Q5UW37 119 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Taf6Q62311 678 aaKnown RBP12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Efcab3Q80X60 432 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Nup107Q8BH74 926 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Oscp1Q8BHW2 379 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Lkaaear1Q8BIG2 198 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Mblac2Q8BL86 279 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Orai1Q8BWG9 304 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Samd7Q8C8Y5 445 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Slc43a2Q8CGA3 568 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Plekho2Q8K124 495 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Uhrf1Q8VDF2 782 aaKnown RBP12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Olfr815Q8VFU0 316 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Trappc2Q9CQP2 140 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Tmem43Q9DBS1 400 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Olfr937Q9EQB4 311 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Tmem27Q9ESG4 222 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Tssc4Q9JHE7 317 aa12.05□□□□□ -0.48
Nup88-203ENSMUST00000108531 Dnah12Q3V0Q1 3086 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Olfr1076A2AK60 313 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Rnf39A2RT81 352 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Gm43720E0CXM8 267 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Ccl26F8VQM2 93 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Zfp870J3QMA4 560 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Vmn2r109K7N747 858 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 AcrP23578 436 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Fads2p1Q0VAX3 487 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Opa3Q505D7 179 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Dvl2Q60838 736 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Ccdc85bQ6PDY0 202 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Luzp2Q8BGY3 345 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Mettl21eQ8CDZ2 244 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Mill2Q8HWE5 355 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Olfr109Q8VG96 314 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Hdac8Q8VH37 377 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Adarb1Q91ZS8 711 aaKnown RBP12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Slc41a3Q921R8 488 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Acss1Q99NB1 682 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 DynapQ9D7M5 161 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Pebp4Q9D9G2 242 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 CalyQ9DCA7 226 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Dgat2Q9DCV3 388 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Ca7Q9ERQ8 264 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 RbpmsQ9WVB0 197 aaKnown RBP12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 NcdnQ9Z0E0 729 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Vmn1r90A0A087WR36 309 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Ms4a7E9Q9V5 267 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 FpgtG5E8F4 590 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Vmn1r168K7N6B6 309 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Gm3755K7N743 167 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Cd14P10810 366 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Gna13P27601 377 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Hoxd9P28357 339 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 RetP35546 1115 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Snrpd2P62317 118 aaKnown RBP12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Cmklr1P97468 371 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Bcap29Q61334 240 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Sohlh1Q6IUP1 357 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Pum1Q80U78 1189 aaKnown RBP12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 BspryQ80YW5 473 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Cpne1Q8C166 536 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Gpr158Q8C419 1200 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Cdc73Q8JZM7 531 aa12.04□□□□□ -0.48
Nup88-203ENSMUST00000108531 Faim2Q8K097 317 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 126.8 ms