RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 NarflQ7TMW6 476 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Il17fQ7TNI7 161 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fam98bQ80VD1 429 aaKnown RBP11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Npsr1Q8BZP8 371 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 AassQ99K67 926 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Heg1E9Q7X6 1337 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 PfplQ5RKV8 702 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dvl2Q60838 736 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rpa2Q62193 270 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Zfp82Q6P9Y7 530 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Adarb1Q91ZS8 711 aaKnown RBP11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Pycr1Q922W5 309 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm11634A0A1B0GSX1 172 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm12248A0A1W2P8B8 313 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Pm20d2A3KG59 431 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dlgap4B1AZP2 992 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tspan15F7BWT7 294 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 TspearJ3S6Y1 670 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 DdcO88533 480 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Hspb6Q5EBG6 162 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc5a10Q5SWY8 596 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Znf750Q8BH05 703 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nudt6Q8CH40 313 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mbtps2Q8CHX6 515 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gpr146Q99LE2 333 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Etv5Q9CXC9 510 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Stard5Q9EPQ7 213 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1025-ps1A0A140T8K3 312 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 NoctO35710 429 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tbrg1Q3UB74 406 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1134Q7TR43 312 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1232Q8VEX7 311 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 RragcQ99K70 398 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 AcoxlQ9DBS4 632 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dazap1Q9JII5 406 aaKnown RBP11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mon2Q80TL7 1715 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fcer1gP20491 86 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 HmgclP38060 325 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tmem18Q3TUD9 140 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Zfp729aQ4QQP3 973 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Pced1aQ6P1Z5 449 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rcor3Q6PGA0 451 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Prickle2Q80Y24 845 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tmprss11gQ8BZ10 417 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r66Q8K4I0 310 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r222Q8R269 308 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tbc1d20Q9D9I4 402 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Emc9Q9DB76 206 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Abhd1Q9QZC8 412 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dhcr7O88455 471 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dcp1bQ3U564 578 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Elavl3Q60900 367 aaKnown RBP11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fads6Q80UG1 342 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Trnp1Q80ZI1 223 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Lpcat3Q91V01 487 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Enpp7D3Z6V6 446 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fgf18O89101 207 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Esp1Q3LHH8 102 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Q3UY34 256 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Sema4cQ64151 834 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fmo9Q8C116 539 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Commd9Q8K2Q0 198 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r188Q8K3N2 308 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Unc50Q9CQ61 259 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Timm22Q9CQ85 194 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1115Q7TR53 326 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r200Q8R281 312 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ankrd7Q9D504 279 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cml5Q9QXS8 227 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rhox2dW4VSN9 191 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cacna1fQ9JIS7 1985 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 TicrrQ8BQ33 1889 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 4930563M21RikA0A1L1SUT5 578 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Zfp54E9PW05 585 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r13G5E8I3 300 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Zfp457L7N1X4 647 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 JrkQ60976 557 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1318Q7TQW6 320 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc22a12Q8CFZ5 553 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1317Q8VF84 316 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr68E9PYY2 315 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm10269G3UWD7 123 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cxcl9P18340 126 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mtf1Q07243 675 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ceacam19Q3TQ88 271 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tsr3Q5HZH2 323 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Hapln3Q80WM5 359 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nkd2Q8VE28 461 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ubap2Q91VX2 1132 aaKnown RBP11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rab30Q923S9 203 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Bbox1Q924Y0 387 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 RgccQ9DBX1 137 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gpr37Q9QY42 600 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 A0A1W2P799 418 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Kcnmb3E9Q7U0 239 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 A430033K04RikE9Q8G5 680 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm8265K7N6Y8 158 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Prrt1O35449 306 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tmem14aP56983 99 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rap1aP62835 184 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 181.5 ms