RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 F2rl3O88634 396 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hoxc11P31313 304 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 GsrP47791 500 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 StsP50427 624 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fabp2P55050 132 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Dvl3Q61062 716 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 TifaQ793I8 184 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mrps5Q99N87 432 aaKnown RBP9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 FtmtQ9D5H4 237 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Prps1Q9D7G0 318 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Xkr6E9Q6C8 638 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn2r99H3BK37 856 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 FhitO89106 150 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Bcl2a1cQ0P538 128 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Dcp1bQ3U564 578 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 1700057G04RikQ3V0U0 232 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Galk2Q68FH4 458 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 2810021J22RikQ8BIB6 539 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ndrg4Q8BTG7 352 aaKnown RBP9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gpr157Q8C206 330 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tmem150cQ8C8S3 249 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tspan33Q8R3S2 283 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr811Q8VFI1 319 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr569Q8VGZ2 314 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zfp65Q91W94 390 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Raf1Q99N57 648 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cry2Q9R194 592 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Abca3Q8R420 1704 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm572B1ARY8 399 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm20547B8JJN0 1276 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Hs3st4D3YVV6 449 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 MstnO08689 376 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 CfbP04186 761 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dlk1Q09163 385 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr270Q7TS19 314 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 SynprQ8BGN8 265 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Slc27a4Q91VE0 643 aaKnown RBP9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Phf6Q9D4J7 364 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Mmp19Q9JHI0 527 aa9.59□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Glb1l3A2RSQ1 649 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Zfp40B1B1D3 796 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn2r111K7N674 857 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dpm1O70152 260 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Zfp1P08042 402 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Rps2P25444 293 aaKnown RBP9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 AregP31955 248 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 MeikinQ5F2C3 434 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr331Q5NC44 324 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Irgm1Q60766 409 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Sema4cQ64151 834 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 MastlQ8C0P0 865 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 MallQ91X49 154 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Nt5dc2Q91X76 390 aaKnown RBP9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Pcdhb20Q91XZ9 799 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Tex19.2Q9D5S1 317 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 TheglQ9DA15 459 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Catsperg1E9Q355 1151 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Galnt9G3X942 604 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cd93O89103 644 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 CalcrQ60755 533 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 ArhgdigQ62160 225 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Peli2Q8BST6 419 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Krt33aQ8K0Y2 404 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Elac1Q8VEB6 362 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr800Q8VFH7 311 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr307Q8VFN8 313 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Q9D112 206 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cyb5r1Q9DB73 305 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Smco4Q9JIS3 59 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 NsdhlQ9R1J0 362 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Rd3lB2RV38 197 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn1r68E9Q0V3 319 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 H2-T24F8VQG4 363 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cyp8b1O88962 500 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 MpoP11247 718 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Htr7P32304 448 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gdi1P50396 447 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Nploc4P60670 608 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Idh3gP70404 393 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 TrmoQ562D6 431 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dyrk1aQ61214 763 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 HpQ61646 347 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Nlgn2Q69ZK9 836 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 CdnfQ8CC36 187 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Slc35b3Q922Q5 369 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 HadhbQ99JY0 475 aaKnown RBP9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr938Q9EQ93 315 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Extl1Q9JKV7 669 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Klhl15A2AAX3 604 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn2r56E9Q4U5 779 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm8888J3QPX5 126 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 NfkbieO54910 364 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gja1P23242 382 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Slc1a3P56564 543 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Wdr20Q3UWE6 569 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm2aQ60648 193 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Six4Q61321 775 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Shc4Q6S5L9 626 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Kng2Q6S9I3 644 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Kcnk12Q76M80 430 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms