RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Kctd17E0CYQ0 296 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 OpcmlG5E8G3 345 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr519K7N645 319 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Rnf13O54965 381 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Pcp2P12660 120 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Slc11a1P41251 548 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Rit1P70426 219 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Acss3Q14DH7 682 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Fam98aQ3TJZ6 515 aaKnown RBP15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Fam105aQ3TVP5 353 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Rnf166Q3U9F6 237 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Bbs1Q3V3N7 593 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Spin2cQ6NVE3 257 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Otub1Q7TQI3 271 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Tmem169Q8BG50 297 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm5591Q8CDK1 855 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr586Q8VH13 317 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cmtm3Q99LJ5 184 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Elp4Q9ER73 422 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm42957D6RFQ2 366 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Vmn2r7E9PYL5 915 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Coq10aE9Q3H6 259 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm20683H3BKJ1 410 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm5849J3QPE5 117 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm4141K9J7H2 306 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Amd1P0DMN7 334 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 MazP56671 477 aaKnown RBP15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 UrodP70697 367 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 RykQ01887 594 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gjb5Q02739 271 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr1152Q7TR34 310 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Otop1Q80VM9 600 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Mgat4aQ812G0 535 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Syt17Q920M7 470 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 AspnQ99MQ4 373 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Mrpl9Q99N94 265 aaKnown RBP15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ttyh1Q9D3A9 450 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Derl3Q9D8K3 228 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 MthfrQ9WU20 654 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr545Q9WU94 316 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Fem1aaQ9Z2G1 654 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Dennd4cA6H8H2 1906 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Rp1P56716 2095 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr1025-ps1A0A140T8K3 312 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr1234A2AVK5 314 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Zfp282E9PVC2 666 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Zfp605E9QAH2 694 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Vmn1r115K7N6Y3 295 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 P01629 112 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Tpgs2Q66JT5 296 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Hs3st2Q673U1 367 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 TtpaQ8BWP5 278 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr722Q8VFC8 308 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr700Q8VFM5 316 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr1426Q8VG74 311 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Frs3Q91WJ0 492 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Glipr1Q9CWG1 255 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Med27Q9DB40 311 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 RrhO35214 337 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Plekhs1Q8BW88 474 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Kcnmb1Q8CAE3 191 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 EcdQ9CS74 641 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 RtcAQ9D7H3 366 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm21865A0A087WRL2 222 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Vmn2r18E9Q280 788 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Tmem44E9Q4M0 433 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Pld3O35405 488 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 IghgP01863 330 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Kcnk9Q3LS21 402 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Mier2Q3U3N0 541 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Xkr7Q5GH64 580 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 XkrxQ5GH68 449 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr538Q7TRT5 310 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Mettl21eQ8CDZ2 244 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Wdr20Q9D5R2 567 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cldnd2Q9D9H2 167 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 SelenofQ9ERR7 162 aa15.73■□□□□ 0.11
Ctcf-201ENSMUST00000005841 IghdA0A0A6YW14 291 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cytl1A1E5L0 139 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Zyg11aA2BFL2 627 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Mfsd4b5E9PYY6 479 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr640E9Q7P5 314 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 P01851 173 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 P01852 173 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Atf4Q06507 349 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cd244Q07763 397 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Q3TYS2 187 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Znf354aQ61751 572 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Asphd2Q80VP9 343 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Bloc1s5Q8R015 185 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cops8Q8VBV7 209 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr1504Q8VFQ4 315 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ces2cQ91WG0 561 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ferd3lQ923Z4 168 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Vmn1r52Q9EP79 309 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Grb14Q9JLM9 538 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Pmm2Q9Z2M7 242 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm364A2AFI6 671 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm5286E0CXI6 357 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Vmn2r58K7N6V2 862 aa15.72■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms