RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Sema3bQ62177 748 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Tvp23aQ6NVH0 222 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Fbxo42Q6PDJ6 717 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Arhgef4Q7TNR9 484 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc5a7Q8BGY9 580 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Mfsd11Q8BJ51 449 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc26a9Q8BU91 790 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr658Q8VGV5 323 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Rcbtb2Q99LJ7 551 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Abcg5Q99PE8 652 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Tmem43Q9DBS1 400 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Ap3s1Q9DCR2 193 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Lgi1Q9JIA1 557 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc22a21Q9WTN6 564 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm4779A0A1B0GR91 561 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Ssc4dA1L0T3 586 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Zfp97E9PZP6 546 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm11397F6V5V4 377 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr1425K7N659 312 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Zfp960L7N267 546 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Ccrl2O35457 360 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 TrhrP21761 393 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Rln1P47932 185 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Gpr39Q5U431 456 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Ppp3r1Q63810 170 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc22a13Q6A4L0 551 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 DmknQ6P253 517 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Polr2mQ6P6I6 366 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Lrrc75bQ7TPD7 306 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Pum1Q80U78 1189 aaKnown RBP15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Zbtb46Q8BID6 600 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Znf770Q8BIQ8 705 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc5a8Q8BYF6 611 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Fam149aQ8CFV2 787 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr692Q8VF03 329 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr669Q8VGU9 317 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Serpinb9gQ8VHQ1 377 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Klhdc8aQ91XA8 350 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 HhatlQ9D1G3 503 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Fgf20Q9ESL9 211 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Plscr3Q9JIZ9 296 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 TapbpQ9R233 465 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 RfxankQ9Z205 269 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 9930021J03RikH3BKP8 2027 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 TrdcA0A0G2JEU3 153 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Gsg1lD3Z7H4 322 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Vmn2r113E9PZA6 856 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Hoxb3P09026 433 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Nr2f6P43136 390 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Entpd6Q3U0P5 455 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Itpripl2Q3UV16 535 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Zic2Q62520 530 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 ScocQ78YZ6 125 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Eri1Q7TMF2 345 aaKnown RBP15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr1275Q7TQY8 312 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Serpinb9fQ80UK5 377 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Pced1bQ8BGX1 433 aaKnown RBP15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Klhl31Q8BWA5 634 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Hbp1Q8R316 516 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Zfp709Q8VC29 727 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Elovl4Q9EQC4 312 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Plxnd1Q3UH93 1925 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Greb1Q3UHK3 1954 aa15.32■□□□□ 0.04
Shh-201ENSMUST00000002708 Adap1E9PY16 374 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 NgpO08692 167 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Map2k4P47809 397 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Gabrb1P50571 474 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Sult2a1P52843 285 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Rras2P62071 204 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 E2f1Q61501 430 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Znf728Q6P5C7 752 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 BspryQ80YW5 473 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Rnf222Q8CEF8 211 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm42417Q8K1D0 126 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 NifkQ91VE6 317 aaKnown RBP15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Hemk1Q921L7 340 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Acox3Q9EPL9 700 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Sorcs2Q9EPR5 1159 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 NsdhlQ9R1J0 362 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Trim3Q9R1R2 744 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Pcdhgb8A0A140LI48 931 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Zbtb25G3UW50 439 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Scarb2O35114 478 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 AcadlP51174 430 aaKnown RBP15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Arpc4P59999 168 aaKnown RBP15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Atp5a1Q03265 553 aaKnown RBP15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Kiaa0895Q7TQE7 519 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc22a29Q8BWG6 551 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Pithd1Q8BWR2 211 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 TifabQ8JZM6 147 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Mrm2Q9CPY0 246 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Med18Q9CZ82 208 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Prl8a8Q9DAS4 241 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 PaicsQ9DCL9 425 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Adat1Q9JHI2 499 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Tas2r103Q9JKA3 312 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Dkk3Q9QUN9 349 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Dock6Q8VDR9 2080 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Dock8Q8C147 2100 aa15.31■□□□□ 0.04
Shh-201ENSMUST00000002708 Cd300cA2A7V7 229 aa15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms