RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	GGN	Q86UU5	652 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	TMCO5A	Q8N6Q1	288 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	OR9I1	Q8NGQ6	314 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	POC1B	Q8TC44	478 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	GPR119	Q8TDV5	335 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	CKAP2	Q8WWK9	683 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	OIT3	Q8WWZ8	545 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	FIG4	Q92562	907 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	ROPN1L	Q96C74	230 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF845	Q96IR2	970 aa	Predicted RBP	13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	LURAP1	Q96LR2	239 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	RMND5A	Q9H871	391 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	MCCC2	Q9HCC0	563 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	JKAMP	Q9P055	326 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	KCNE5	Q9UJ90	142 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	L3MBTL1	Q9Y468	752 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	WDR45	Q9Y484	360 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939		A0A1W2PNV4	684 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	FAM234B	A2RU67	622 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	EIF1AY	O14602	144 aa	Known RBP	13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	KRT75	O95678	551 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	CRH	P06850	196 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	MRPL19	P49406	292 aa	Known RBP	13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	IDH3A	P50213	366 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	AQP5	P55064	265 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	STX1B	P61266	288 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	HPCA	P84074	193 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	FOXF1	Q12946	379 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	MYBPH	Q13203	477 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	PON3	Q15166	354 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	SGCB	Q16585	318 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	NDUFAF6	Q330K2	333 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	TIGD2	Q4W5G0	525 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	GPAT3	Q53EU6	434 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	TYW3	Q6IPR3	259 aa	Known RBP	13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	FRRS1	Q6ZNA5	592 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	EIF3M	Q7L2H7	374 aa	Known RBP	13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	TOR1AIP2	Q8NFQ8	470 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	RFWD2	Q8NHY2	731 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	FNDC9	Q8TBE3	224 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	ARSG	Q96EG1	525 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	ITCH	Q96J02	903 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	MAGEB18	Q96M61	343 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	EBF4	Q9BQW3	602 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	ZNF559	Q9BR84	538 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	CCDC28B	Q9BUN5	200 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	LAT2	Q9GZY6	243 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	SAP130	Q9H0E3	1048 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	PIGM	Q9H3S5	423 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	LIPT1	Q9Y234	373 aa		13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	GPC6	Q9Y625	555 aa	Predicted RBP	13.52	□□□□□ -0.25
PHGDH-231	ENST00000641939	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	CENPVL1	A0A0U1RR11	272 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	PRAMEF27	A3QJZ7	478 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	ADAMDEC1	O15204	470 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	TNFSF13	O75888	250 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	H6PD	O95479	791 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	ANP32D	O95626	131 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	CSTA	P01040	98 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	OPN1LW	P04000	364 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	ZCCHC18	P0CG32	403 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	FCGR2A	P12318	317 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	ELK4	P28324	431 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	ADH6	P28332	368 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	MAGEA8	P43361	318 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	KIR2DL3	P43628	341 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	EIF1AX	P47813	144 aa	Known RBP	13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	CCR4	P51679	360 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	SKP2	Q13309	424 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	CBFB	Q13951	182 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	TOMM34	Q15785	309 aa	Predicted RBP	13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	MAPK14	Q16539	360 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	CTU2	Q2VPK5	515 aa	Known RBP	13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	PDSS1	Q5T2R2	415 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	ESPNL	Q6ZVH7	1005 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	KIF18B	Q86Y91	864 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	LILRA2	Q8N149	483 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	ZNF619	Q8N2I2	560 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	OR5W2	Q8NH69	310 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	OR10D3	Q8NH80	312 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	OR2V1	Q8NHB1	315 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	FBXO27	Q8NI29	283 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	PNPT1	Q8TCS8	783 aa	Known RBP	13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	ZFP90	Q8TF47	636 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	VPS33A	Q96AX1	596 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	ADGRG7	Q96K78	797 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	TRNT1	Q96Q11	434 aa	Known RBP	13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	TMEM185B	Q9H7F4	350 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	SLC6A13	Q9NSD5	602 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	PACSIN3	Q9UKS6	424 aa		13.51	□□□□□ -0.25
PHGDH-231	ENST00000641939	UBTFL6	P0CB48	400 aa	Predicted RBP	13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	PRKCA	P17252	672 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	IL11	P20809	199 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	CPA2	P48052	419 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	CHRNE	Q04844	493 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	SNTB1	Q13884	538 aa	Known RBP	13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	FGFBP1	Q14512	234 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	SYPL1	Q16563	259 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms