RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 DCAF12L2Q5VW00 463 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 PYHIN1Q6K0P9 492 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 BVESQ8NE79 360 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 ABHD4Q8TB40 342 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 GHSRQ92847 366 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 COL26A1Q96A83 441 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 CMSS1Q9BQ75 279 aaKnown RBP12.81□□□□□ -0.36
SCARB2-227ENST00000640957 SLC6A17Q9H1V8 727 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 ESRP2Q9H6T0 727 aaKnown RBP12.81□□□□□ -0.36
SCARB2-227ENST00000640957 NOX3Q9HBY0 568 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 BABAM2Q9NXR7 383 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 PIPOXQ9P0Z9 390 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 SLC13A4Q9UKG4 626 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 ACSL5Q9ULC5 683 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 PCDHGA5Q9Y5G8 931 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 MCRIP1C9JLW8 97 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 SDC3O75056 442 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 CBSLP0DN79 551 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 CBSP35520 551 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 NAA10P41227 235 aaPredicted RBP12.8□□□□□ -0.36
SCARB2-227ENST00000640957 MC2RQ01718 297 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 LINC00303Q3SY05 128 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 ZDHHC20Q5W0Z9 365 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 ZCCHC12Q6PEW1 402 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 TPRG1Q6ZUI0 275 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 SSX6Q7RTT6 188 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 SLC16A13Q7RTY0 426 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 TMEM25Q86YD3 366 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 CHCHD4Q8N4Q1 142 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 RASGEF1AQ8N9B8 481 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 OR51A7Q8NH64 312 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 C3orf49Q96BT1 292 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 LDAHQ9H6V9 325 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 SLC6A20Q9NP91 592 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 FGF20Q9NP95 211 aaPredicted RBP12.8□□□□□ -0.36
SCARB2-227ENST00000640957 CBLCQ9ULV8 474 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 DYRK1BQ9Y463 629 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 SCN10AQ9Y5Y9 1956 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 HOXA2O43364 376 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 ZDHHC11BP0C7U3 371 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 PSMA3P25788 255 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 BMP8BP34820 402 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 KCNJ3P48549 501 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 SPINT3P49223 89 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 SORDQ00796 357 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 CAMK1Q14012 370 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 KCNAB1Q14722 419 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 CXXC5Q7LFL8 322 aaKnown RBP12.8□□□□□ -0.36
SCARB2-227ENST00000640957 BMP8AQ7Z5Y6 402 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 DCAF4L2Q8NA75 395 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 OR8S1Q8NH09 359 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 OTUB2Q96DC9 234 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 MRPS24Q96EL2 167 aaKnown RBP12.8□□□□□ -0.36
SCARB2-227ENST00000640957 OR14A2Q96R54 314 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 TMEM231Q9H6L2 316 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 MOKQ9UQ07 419 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 LIPT1Q9Y234 373 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 ACOD1A6NK06 481 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 LINC00587B1AMM8 73 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 IDSB3KWA1 339 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 LRRN3E7EW58 273 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 PLPP1O14494 284 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 NDUFA2O43678 99 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 FCMRO60667 390 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF821O75541 412 aaPredicted RBP12.8□□□□□ -0.36
SCARB2-227ENST00000640957 RP2O75695 350 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 PRG2P13727 222 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 AGERQ15109 404 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 PUS10Q3MIT2 529 aaKnown RBP12.8□□□□□ -0.36
SCARB2-227ENST00000640957 OTPQ5XKR4 325 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 RNF165Q6ZSG1 346 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 TMUB2Q71RG4 321 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 BTN2A1Q7KYR7 527 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 CHST9Q7L1S5 443 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 TBC1D19Q8N5T2 526 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 ACBD7Q8N6N7 88 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 CLRN3Q8NCR9 226 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 NANPQ8TBE9 248 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 SMPDL3AQ92484 453 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF558Q96NG5 402 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 LRRN3Q9H3W5 708 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 HRASLSQ9HDD0 168 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 SLC25A13Q9UJS0 675 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 CCL26Q9Y258 94 aa12.8□□□□□ -0.36
SCARB2-227ENST00000640957 NLRC5Q86WI3 1866 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 H7BY64 318 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 GOSR2O14653 212 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 RBMS1P29558 406 aaKnown RBP12.79□□□□□ -0.36
SCARB2-227ENST00000640957 CMTM4Q8IZR5 234 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 OR56B4Q8NH76 319 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 OR1S1Q8NH92 325 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 PRAP1Q96NZ9 151 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 BTBD1Q9H0C5 482 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 SYNPO2LQ9H987 977 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 EDARQ9UNE0 448 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 INSL5Q9Y5Q6 135 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-227ENST00000640957 AGAP14A8MT82 685 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 A8MVJ9 347 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 FAM171A2A8MVW0 826 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms