RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CASTOR1Q8WTX7 329 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 PGAM5Q96HS1 289 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 NT5DC2Q9H857 520 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 CUTCQ9NTM9 273 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 BABAM2Q9NXR7 383 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 TBC1D29Q9UFV1 150 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 KANTRA0A1W2PQU2 76 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 LCN1P31025 176 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 OR6Q1Q8NGQ2 317 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 PBX4Q9BYU1 374 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-223ENST00000640640 H0Y8X5 98 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 ERCC1P07992 297 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-223ENST00000640640 EIF5AP63241 154 aaKnown RBP16.41■□□□□ 0.22
SCARB2-223ENST00000640640 CDKN3Q16667 212 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 MEPCEQ7L2J0 689 aaKnown RBP16.41■□□□□ 0.22
SCARB2-223ENST00000640640 PLCZ1Q86YW0 608 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 ALDH16A1Q8IZ83 802 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 DUS3LQ96G46 650 aaKnown RBP16.41■□□□□ 0.22
SCARB2-223ENST00000640640 TMEM185BQ9H7F4 350 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 AK6Q9Y3D8 172 aaKnown RBP16.41■□□□□ 0.22
SCARB2-223ENST00000640640 DOCK5Q9H7D0 1870 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 SEC14L5O43304 696 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 ANXA3P12429 323 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 ALDH3B2P48448 385 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 B4GALNT1Q00973 533 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 HES5Q5TA89 166 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 LYSMD4Q5XG99 296 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 OR51Q1Q8NH59 317 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 FAM174AQ8TBP5 190 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 UBE2FQ969M7 185 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 DDIT4LQ96D03 193 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 CLCC1Q96S66 551 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 ACTR6Q9GZN1 396 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 EVA1AQ9H8M9 152 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 OR51B4Q9Y5P0 310 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF831Q5JPB2 1677 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 C13orf42A0A1B0GVH6 325 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 BLACEA4D250 179 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 CTDSP2O14595 271 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 TNFRSF10CO14798 259 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 PTHP01270 115 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 FXYD6P3P58550 94 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 PLP2Q04941 152 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 TDGQ13569 410 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 ACSM3Q53FZ2 586 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 RNF113BQ8IZP6 322 aaKnown RBP16.41■□□□□ 0.22
SCARB2-223ENST00000640640 RHOXF1Q8NHV9 184 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 ASB15Q8WXK1 588 aa16.41■□□□□ 0.22
SCARB2-223ENST00000640640 NAA11Q9BSU3 229 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-223ENST00000640640 TEX13DA0A0J9YY54 714 aaPredicted RBP16.4■□□□□ 0.22
SCARB2-223ENST00000640640 A0A1B0GVG6 124 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 SYPP08247 313 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF81P51508 661 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 LILRA6Q6PI73 481 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 OR13C2Q8NGS9 318 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 SLC37A2Q8TED4 501 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 PCDHB16Q9NRJ7 776 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 P04436 131 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 OTX2P32243 289 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 SFTPDP35247 375 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 RAB2AP61019 212 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 WBP2NLQ6ICG8 309 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 PYHIN1Q6K0P9 492 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 MS4A6EQ96DS6 147 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 C4orf36Q96KX1 117 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 URM1Q9BTM9 101 aaKnown RBP16.4■□□□□ 0.22
SCARB2-223ENST00000640640 MRPL15Q9P015 296 aaKnown RBP16.4■□□□□ 0.22
SCARB2-223ENST00000640640 SLC23A2Q9UGH3 650 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 KRBA1A5PL33 1030 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 TVP23AA6NH52 213 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 SYNGR4O95473 234 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 H2AFB2P0C5Z0 115 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 CRABP1P29762 137 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 NKX3-2P78367 333 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 LPAL2Q16609 132 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 MFSD12Q6NUT3 480 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 FOXRED2Q8IWF2 684 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 IQCF2Q8IXL9 164 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 LRRC56Q8IYG6 542 aaPredicted RBP16.4■□□□□ 0.22
SCARB2-223ENST00000640640 OR13C3Q8NGS6 347 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 MAP3K3Q99759 626 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCARB2-223ENST00000640640 B4GALT7Q9UBV7 327 aa16.4■□□□□ 0.22
SCARB2-223ENST00000640640 PDX1P52945 283 aa16.39■□□□□ 0.22
SCARB2-223ENST00000640640 MYADMQ96S97 322 aa16.39■□□□□ 0.22
SCARB2-223ENST00000640640 OR52A5Q9H2C5 316 aa16.39■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF337Q9Y3M9 751 aa16.39■□□□□ 0.22
SCARB2-223ENST00000640640 CENPBD1B2RD01 187 aa16.39■□□□□ 0.21
SCARB2-223ENST00000640640 ARHGAP33O14559 1287 aa16.39■□□□□ 0.21
SCARB2-223ENST00000640640 BCAT2O15382 392 aaPredicted RBP16.39■□□□□ 0.21
SCARB2-223ENST00000640640 LYRM1O43325 122 aa16.39■□□□□ 0.21
SCARB2-223ENST00000640640 SLC19A1P41440 591 aa16.39■□□□□ 0.21
SCARB2-223ENST00000640640 KIAA1024LP59773 190 aa16.39■□□□□ 0.21
SCARB2-223ENST00000640640 ISL1P61371 349 aa16.39■□□□□ 0.21
SCARB2-223ENST00000640640 EEF1A1P5Q5VTE0 462 aa16.39■□□□□ 0.21
SCARB2-223ENST00000640640 KCTD9Q7L273 389 aa16.39■□□□□ 0.21
SCARB2-223ENST00000640640 UEVLDQ8IX04 471 aa16.39■□□□□ 0.21
SCARB2-223ENST00000640640 SIDT1Q9NXL6 827 aaKnown RBP16.39■□□□□ 0.21
SCARB2-223ENST00000640640 TMPRSS11DO60235 418 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms