RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 GPR119Q8TDV5 335 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF607Q96SK3 696 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 CDRT15Q96T59 188 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 CACYBPQ9HB71 228 aaKnown RBP11.97□□□□□ -0.49
GTF3A-209ENST00000640289 HHATLQ9HCP6 504 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 MED17Q9NVC6 651 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 AP3M1Q9Y2T2 418 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 COL6A6A6NMZ7 2263 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 CDHR4A6H8M9 788 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 PRORSD1PA6NEY8 169 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 NPIPA2E9PIF3 369 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 NPIPA3F8WFD2 350 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 AQP7O14520 342 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 AP3D1O14617 1153 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 FRS3O43559 492 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 SUSD5O60279 629 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 MFN2O95140 757 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 LINGO3P0C6S8 592 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 GKN3PP0CG01 181 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 PLA2G2AP14555 144 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 BMP7P18075 431 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF41P51814 821 aaPredicted RBP11.96□□□□□ -0.49
GTF3A-209ENST00000640289 CRYBA2P53672 197 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 SUMO3P55854 103 aaPredicted RBP11.96□□□□□ -0.49
GTF3A-209ENST00000640289 GFRA1P56159 465 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 B3GALT5-AS1P59052 145 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 CBFBQ13951 182 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 VEZF1Q14119 521 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 PLPPR5Q32ZL2 321 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 DCST1Q5T197 706 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 INTS11Q5TA45 600 aaKnown RBP11.96□□□□□ -0.49
GTF3A-209ENST00000640289 RAET1LQ5VY80 246 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 ARHGAP11AQ6P4F7 1023 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 CCDC80Q76M96 950 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 ATCAYQ86WG3 371 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 ARMC8Q8IUR7 673 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 FAM156AQ8NDB6 213 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 TOR1AIP2Q8NFQ8 470 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 OR5W2Q8NH69 310 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 POC1BQ8TC44 478 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 TAMM41Q96BW9 452 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 SFXN2Q96NB2 322 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 KCTD14Q9BQ13 255 aaPredicted RBP11.96□□□□□ -0.49
GTF3A-209ENST00000640289 SPATA5L1Q9BVQ7 753 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 UGT2B28Q9BY64 529 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 EXOSC3Q9NQT5 275 aaKnown RBP11.96□□□□□ -0.49
GTF3A-209ENST00000640289 NDE1Q9NXR1 346 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF232Q9UNY5 417 aa11.96□□□□□ -0.49
GTF3A-209ENST00000640289 MRPS18CQ9Y3D5 142 aaKnown RBP11.96□□□□□ -0.49
GTF3A-209ENST00000640289 NINQ8N4C6 2090 aa11.96□□□□□ -0.5
GTF3A-209ENST00000640289 NCKAP5O14513 1909 aa11.96□□□□□ -0.5
GTF3A-209ENST00000640289 CHD6Q8TD26 2715 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 DNAJA2O60884 412 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 SERPINB7O75635 380 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 PRG2P13727 222 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 NCK1P16333 377 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 ABOP16442 354 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 TCN1P20061 433 aaPredicted RBP11.95□□□□□ -0.5
GTF3A-209ENST00000640289 PRKAR1BP31321 381 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 PTGS2P35354 604 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 STARP49675 285 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 HOXC5Q00444 222 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 CRYZQ08257 329 aaKnown RBP11.95□□□□□ -0.5
GTF3A-209ENST00000640289 EPS8Q12929 822 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 FOXF1Q12946 379 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 ELOAQ14241 798 aaKnown RBP11.95□□□□□ -0.5
GTF3A-209ENST00000640289 QPRTQ15274 297 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 C3AR1Q16581 482 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 DUSP7Q16829 419 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 EIF2S3LQ2VIR3 472 aaKnown RBP11.95□□□□□ -0.5
GTF3A-209ENST00000640289 LRRC23Q53EV4 343 aaPredicted RBP11.95□□□□□ -0.5
GTF3A-209ENST00000640289 DHRS4L2Q6PKH6 230 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 C6orf89Q6UWU4 347 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 PATL1Q86TB9 770 aaKnown RBP11.95□□□□□ -0.5
GTF3A-209ENST00000640289 GRAMD2AQ8IUY3 354 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 GPR32P1Q8NGA4 272 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 FIG4Q92562 907 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 DTNBP1Q96EV8 351 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 WFDC6Q9BQY6 131 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 TAS2R1Q9NYW7 299 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 EGFL7Q9UHF1 273 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 SH3BGRL2Q9UJC5 107 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 OSGIN2Q9Y236 505 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 SPTA1P02549 2419 aa11.95□□□□□ -0.5
GTF3A-209ENST00000640289 SHANK1Q9Y566 2161 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 A0A087WZY1 265 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 OR2M5A3KFT3 312 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 CFAP73A6NFT4 308 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 FAM47E-STBD1D6RA91 191 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 CXCR6O00574 342 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 GSTA4O15217 222 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 SLC19A2O60779 497 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 TPOP07202 933 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 PRKCAP17252 672 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 PGCP20142 388 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 IL11P20809 199 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 CD247P20963 164 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 KDELR2P33947 212 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 MSX2P35548 267 aaPredicted RBP11.94□□□□□ -0.5
GTF3A-209ENST00000640289 ACAA2P42765 397 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms