RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 MEMO1Q9Y316 297 aa6.6□□□□□ -1.35
NECAP1-220ENST00000639841 PPIAL4AQ9Y536 164 aa6.6□□□□□ -1.35
NECAP1-220ENST00000639841 DMXL1Q9Y485 3027 aa6.6□□□□□ -1.35
NECAP1-220ENST00000639841 SPTBN2O15020 2390 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 PPIAL4CA0A0B4J2A2 164 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 A0A1B0GTL3 188 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 DPPA5A6NC42 116 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 TRPC5OSA6NMA1 111 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 SRRM4A7MD48 611 aaKnown RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 STX11O75558 287 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 PPIAL4GP0DN37 164 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 IL32P24001 234 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 HNRNPH1P31943 449 aaKnown RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 PAX5Q02548 391 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 USF2Q15853 346 aaPredicted RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 PHLDA2Q53GA4 152 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 ZNF542PQ5EBM4 170 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 CEACAM20Q6UY09 585 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 GSPT2Q8IYD1 628 aaKnown RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 DDHD1Q8NEL9 900 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 NFAM1Q8NET5 270 aaPredicted RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 SDR9C7Q8NEX9 313 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 OR6M1Q8NGM8 313 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 C18orf25Q96B23 403 aaPredicted RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 LMLNQ96KR4 655 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 HINT2Q9BX68 163 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 NLNQ9BYT8 704 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 LRRC19Q9H756 370 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 ACKR4Q9NPB9 350 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 CNGB3Q9NQW8 809 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 DDX19AQ9NUU7 478 aaKnown RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 DUS2Q9NX74 493 aaKnown RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 EMC3Q9P0I2 261 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 STOX2Q9P2F5 926 aaPredicted RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 SLC7A8Q9UHI5 535 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 PRELID1Q9Y255 219 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 NPTNQ9Y639 398 aa6.59□□□□□ -1.35
NECAP1-220ENST00000639841 ZNF638Q14966 1978 aaKnown RBP6.59□□□□□ -1.35
NECAP1-220ENST00000639841 A0A1W2PPE3 182 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 CNOT1A5YKK6 2376 aaKnown RBP6.58□□□□□ -1.36
NECAP1-220ENST00000639841 PDZK1P1A8MUH7 402 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 POC1B-GALNT4F8VUJ3 575 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 BUD23O43709 281 aaKnown RBP6.58□□□□□ -1.36
NECAP1-220ENST00000639841 GRAP2O75791 330 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 LCA5LO95447 670 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 BMP15O95972 392 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 PRF1P14222 555 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 NQO2P16083 231 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 OTX1P32242 354 aaPredicted RBP6.58□□□□□ -1.36
NECAP1-220ENST00000639841 MYH11P35749 1972 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 HELZP42694 1942 aaKnown RBP6.58□□□□□ -1.36
NECAP1-220ENST00000639841 OSTNP61366 133 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 EML5Q05BV3 1969 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF77Q15935 545 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 ETFDHQ16134 617 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 MRPL23Q16540 153 aaKnown RBP6.58□□□□□ -1.36
NECAP1-220ENST00000639841 C6orf183Q5T699 404 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 C9orf57Q5W0N0 161 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 MON1BQ7L1V2 547 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 BHLHA15Q7RTS1 189 aaPredicted RBP6.58□□□□□ -1.36
NECAP1-220ENST00000639841 PIP4P1Q86T03 277 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 SERPINA9Q86WD7 417 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 GPSM1Q86YR5 675 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 TP53INP2Q8IXH6 220 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 ST13P4Q8IZP2 240 aaPredicted RBP6.58□□□□□ -1.36
NECAP1-220ENST00000639841 FGFRL1Q8N441 504 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 TMEM161BQ8NDZ6 487 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 PROKR2Q8NFJ6 384 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 OR5R1Q8NH85 324 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 RPLP0P6Q8NHW5 317 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 ASB5Q8WWX0 329 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 TMEM37Q8WXS4 190 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 NUP205Q92621 2012 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 SEMA4DQ92854 862 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 SLC29A1Q99808 456 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 AGPAT1Q99943 283 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 SPAG4Q9NPE6 437 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 TUBGCP4Q9UGJ1 667 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 WDR45Q9Y484 360 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 CEP295Q9C0D2 2601 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 OBSL1O75147 1896 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 NCANO14594 1321 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 TUBAL3A6NHL2 446 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 LRRC30A6NM36 301 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 E7ENQ6 273 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 J3KR12 359 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 PIRO00625 290 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 CALCAP01258 141 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 APODP05090 189 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 EDN1P05305 212 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF883P0CG24 379 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 CXCL8P10145 99 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 CDK4P11802 303 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 PPP2R1BP30154 601 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 NAA10P41227 235 aaPredicted RBP6.58□□□□□ -1.36
NECAP1-220ENST00000639841 P2RY2P41231 377 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 CRATP43155 626 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 ATP12AP54707 1039 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 ATP5J2P56134 94 aa6.58□□□□□ -1.36
NECAP1-220ENST00000639841 EARS2Q5JPH6 523 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms