RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 COMMD3Q9UBI1 195 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 LHX6Q9UPM6 363 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 MRPS33Q9Y291 106 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 USP42Q9H9J4 1324 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ANKRD36CQ5JPF3 1778 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 A0A087X1B8 175 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TRBV7-9A0A0J9YWB2 115 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TCRBP04435 133 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 HTR2CP28335 458 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 CLDN18P56856 261 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 STXBP1P61764 594 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ARSJQ5FYB0 599 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 C9orf50Q5SZB4 431 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 GLYATQ6IB77 296 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 FIGLAQ6QHK4 219 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 C15orf54Q8N8G6 183 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 C11orf40Q8WZ69 217 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SLC35C1Q96A29 364 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 GFM1Q96RP9 751 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SGK2Q9HBY8 427 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 MBNL1Q9NR56 388 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 VNN3Q9NY84 501 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 USP21Q9UK80 565 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 PRPF19Q9UMS4 504 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SPHKAPQ2M3C7 1700 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 CEP250Q9BV73 2442 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 D6RAR5 112 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SCDO00767 359 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 MRPS14O60783 128 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ZBTB7AO95365 584 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 CST2P09228 141 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 VIPR1P32241 457 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 MMP12P39900 470 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 KIR3DL1P43629 444 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 RRAS2P62070 204 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 HYAL2Q12891 473 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 GPNMBQ14956 572 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 PDLIM3Q53GG5 364 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 REEP3Q6NUK4 255 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 LANCL3Q6ZV70 420 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TTLL10Q6ZVT0 673 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 GTF2H5Q6ZYL4 71 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ARRDC1Q8N5I2 433 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SKA2Q8WVK7 121 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TAAR6Q96RI8 345 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ATG101Q9BSB4 218 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 DPH7Q9BTV6 452 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 MS4A7Q9GZW8 240 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 OR10A5Q9H207 317 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 HRASLSQ9HDD0 168 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 MIEF1Q9NQG6 463 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 KIAA1024Q9UPX6 916 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 POMPQ9Y244 141 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 NCANO14594 1321 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SPATA31A6Q5VVP1 1343 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ASXL2Q76L83 1435 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 LRIT2A6NDA9 550 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TBC1D3BA6NDS4 549 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 YDJCA8MPS7 323 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 HNRNPDLO14979 420 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 CPNE6O95741 557 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 INHAP05111 366 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 FOLR2P14207 255 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 EVX2Q03828 476 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ELAVL2Q12926 359 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ENPP2Q13822 863 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM249Q2WGJ8 235 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SOWAHCQ53LP3 525 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TBC1D3GQ6DHY5 549 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SLC29A4Q7RTT9 530 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 NRARPQ7Z6K4 114 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 LCORQ96JN0 433 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 JAM3Q9BX67 310 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SAMD4AQ9UPU9 718 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ZGRF1Q86YA3 2104 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 CD109Q6YHK3 1445 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 C2orf78A6NCI8 922 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 I6L893 689 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 KCNE1P15382 129 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 CDK8P49336 464 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TAS2R38P59533 333 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SURF2Q15527 256 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 MAPK14Q16539 360 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 OXLD1Q5BKU9 147 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 DCAF15Q66K64 600 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 GDF7Q7Z4P5 450 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 DHRSXQ8N5I4 330 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TSTD1Q8NFU3 115 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 ARNTL2Q8WYA1 636 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 FKBP10Q96AY3 582 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 DCAF5Q96JK2 942 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 PLEKHJ1Q9NW61 149 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 COL20A1Q9P218 1284 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 NUFIP1Q9UHK0 495 aaKnown RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 CASP8AP2Q9UKL3 1982 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 TRAPPC13A5PLN9 417 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 SNNO75324 88 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-209ENST00000639244 MT-ND4P03905 459 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 CRHBPP24387 322 aa4.04□□□□□ -1.76
SCN3A-209ENST00000639244 IVDP26440 423 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms