RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 HAVCR2Q8TDQ0 301 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 ADAMTS16Q8TE57 1224 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 INTS14Q96SY0 518 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 PLEKHJ1Q9NW61 149 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 KCNIP1Q9NZI2 227 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF443Q9Y2A4 671 aaPredicted RBP17.36■□□□□ 0.37
SCARB2-213ENST00000638680 SELENOVP59797 346 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 MEF2DQ14814 521 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 LRRC37A3O60309 1634 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 IFNA10P01566 189 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF865P0CJ78 1059 aaPredicted RBP17.36■□□□□ 0.37
SCARB2-213ENST00000638680 TAS2R20P59543 309 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 HNRNPKP61978 463 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCARB2-213ENST00000638680 RPS25P62851 125 aaKnown RBP17.36■□□□□ 0.37
SCARB2-213ENST00000638680 HBA1P69905 142 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 CLEC14AQ86T13 490 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 FNDC9Q8TBE3 224 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 SGCZQ96LD1 299 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 OR7D2Q96RA2 312 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 MYADMQ96S97 322 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 METTL17Q9H7H0 456 aaPredicted RBP17.36■□□□□ 0.37
SCARB2-213ENST00000638680 PLEKHA3Q9HB20 300 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF334Q9HCZ1 680 aaPredicted RBP17.36■□□□□ 0.37
SCARB2-213ENST00000638680 INPP5EQ9NRR6 644 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 OR56B2PQ8NGI1 322 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 OR52A4PA6NMU1 304 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 PIP5K1CO60331 668 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 TRNP1Q6NT89 227 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 TSSK4Q6SA08 328 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 USP53Q70EK8 1073 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 CELF2-AS1Q8N7Q2 184 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 ARNT2Q9HBZ2 717 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 TAS2R16Q9NYV7 291 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 ABRACLQ9P1F3 81 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 FAM83HQ6ZRV2 1179 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 IL17RCQ8NAC3 791 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 RCBTB1Q8NDN9 531 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 UHRF1Q96T88 793 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 CENPOQ9BU64 300 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 HINT2Q9BX68 163 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 LDB3O75112 727 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 PTHP01270 115 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 UBBP0CG47 229 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 UBCP0CG48 685 aaKnown RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 CHRNB1P11230 501 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 SORDQ00796 357 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 SLC5A12Q1EHB4 618 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 CLLU1OSQ5K130 101 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 METAP1DQ6UB28 335 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 MEX3BQ6ZN04 569 aaKnown RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 NPAP1Q9NZP6 1156 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF225Q9UK10 706 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 SGK494L7N484 410 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 DVL2O14641 736 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 FZD7O75084 574 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 SNAPINO95295 136 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF26P17031 533 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 RPS27AP62979 156 aaKnown RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 UBA52P62987 128 aaKnown RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 CXADRP78310 365 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 LTBQ06643 244 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 C14orf28Q4W4Y0 310 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 SIMC1Q8NDZ2 872 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 OR4D6Q8NGJ1 314 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 ARRDC2Q8TBH0 407 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 TSPAN10Q9H1Z9 355 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 PSORS1C1Q9UIG5 152 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 LRP6O75581 1613 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 hCG_1807616A0A1W2PRN6 198 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 CIB4A0PJX0 185 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 SNRNP70P08621 437 aaKnown RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 RAC2P15153 192 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 PRAMEF8Q5VWM4 474 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 PRAMEF7Q5VXH5 474 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 FOXJ1Q92949 421 aa17.35■□□□□ 0.37
SCARB2-213ENST00000638680 FOXRED1Q96CU9 486 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-213ENST00000638680 ATXN1LP0C7T5 689 aaKnown RBP17.34■□□□□ 0.37
SCARB2-213ENST00000638680 CTSCP53634 463 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 BATFQ16520 125 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 BCL2A1Q16548 175 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF322Q6U7Q0 402 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-213ENST00000638680 OR1S1Q8NH92 325 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 HRH4Q9H3N8 390 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 H3BML4 177 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 CD6P30203 668 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 CCNJQ5T5M9 372 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 RBM24Q9BX46 236 aaKnown RBP17.34■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF160Q9HCG1 818 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 STARD5Q9NSY2 213 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 OR6C6A6NF89 314 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 OTOL1A6NHN0 477 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF705FA8MVS1 300 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-213ENST00000638680 GAPDHSO14556 408 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-213ENST00000638680 ATG12O94817 140 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 SLC34A2O95436 690 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 JMJD7P0C870 316 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF705DP0CH99 300 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF705BP0CI00 300 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-213ENST00000638680 GABRA5P31644 462 aa17.34■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF136P52737 540 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms