RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 SSX9Q7RTT3 188 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 OR4A16Q8NH70 328 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 ULBP2Q9BZM5 246 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 NPFFR2Q9Y5X5 522 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC16A7O60669 478 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 ITGB2P05107 769 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 CD38P28907 300 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 ACTA2P62736 377 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 ACTG2P63267 376 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 SF3B4Q15427 424 aaKnown RBP eCLIP16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 EPGNQ6UW88 154 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 VRK2Q86Y07 508 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 SGPP2Q8IWX5 399 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 C15orf40Q8WUR7 153 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 CCDC106Q9BWC9 280 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 ZNF576Q9H609 170 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 CHEK1O14757 476 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 GPR39O43194 453 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 MITFO75030 526 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 CD1DP15813 335 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 ZNF182P17025 639 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 PIN1Q13526 163 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 SFT2D3Q587I9 215 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 KIDINS220Q9ULH0 1771 aa16.77■□□□□ 0.27
CACNA1A-227ENST00000636549 NKX3-2P78367 333 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 SMIM14Q96QK8 99 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 NTMT1Q9BV86 223 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 ZNF45Q02386 682 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 EXOSC2Q13868 293 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 KCNAB1Q14722 419 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 ARFGAP1Q8N6T3 406 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 OR2T4Q8NH00 348 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 SYT3Q9BQG1 590 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 BOKQ9UMX3 212 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 ZNF439Q8NDP4 499 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 TIMM29Q9BSF4 260 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 CHST11Q9NPF2 352 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 ALDH3B2P48448 385 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 HSD11B1LQ7Z5J1 315 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 RABEPKQ7Z6M1 372 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 ZDHHC14Q8IZN3 488 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 MED20Q9H944 212 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 TMEM9Q9P0T7 183 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 CPNE7Q9UBL6 633 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 GPR160Q9UJ42 338 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 CAMTA1Q9Y6Y1 1673 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 B4DXG7 233 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 H3BNX3 289 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 SLITRK5O94991 958 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 EGFP01133 1207 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 RAB3BP20337 219 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 EFNA3P52797 238 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 SLC22A25Q6T423 547 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 SLC6A18Q96N87 628 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 MCOLN1Q9GZU1 580 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 SQORQ9Y6N5 450 aa16.76■□□□□ 0.27
CACNA1A-227ENST00000636549 KLF11O14901 512 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 SOCS5O75159 536 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 DUSP2Q05923 314 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 HHATLQ9HCP6 504 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 MYNNQ9NPC7 610 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 BCL6P41182 706 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 MLF2Q15773 248 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 ZBED5Q49AG3 693 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 OR5W2Q8NH69 310 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 BORCS6Q96GS4 357 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 VN1R3Q9BXE9 311 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 EMC3Q9P0I2 261 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 ARSBP15848 533 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 IDUAP35475 653 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 TGFBR3Q03167 851 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 SLC35D2Q76EJ3 337 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 TMEM110Q86TL2 294 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 DUSP23Q9BVJ7 150 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 SIX2Q9NPC8 291 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 GALNT2Q10471 571 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 ZNF404Q494X3 552 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 CLLU1OSQ5K130 101 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 NLRC3Q7RTR2 1065 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 NAGSQ8N159 534 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 FAM159BA6NKW6 160 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 ONECUT2O95948 504 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 CXCR4P61073 352 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 OR2B11Q5JQS5 317 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 SECTM1Q8WVN6 248 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 PINX1Q96BK5 328 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 NPIPB15A6NHN6 443 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 FAM183AA6NL82 134 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 NRG2O14511 850 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 PRKRAO75569 313 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 NDUFAF7Q7L592 441 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 DUSP19Q8WTR2 217 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 SCRN2Q96FV2 425 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 SLC45A3Q96JT2 553 aa16.75■□□□□ 0.27
CACNA1A-227ENST00000636549 PIGRP01833 764 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 TAS2R20P59543 309 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 MRPS34P82930 218 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 OBP2AQ9NY56 170 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 EMC9Q9Y3B6 208 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 TCAPO15273 167 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms