RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 OR5K2Q8NHB8 316 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 FANK1Q8TC84 345 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 MYLIPQ8WY64 445 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 KISS1RQ969F8 398 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 ZG16BQ96DA0 208 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 PGLYRP3Q96LB9 341 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 SFXN2Q96NB2 322 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF558Q96NG5 402 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 CD180Q99467 661 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 B3GNT4Q9C0J1 378 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 PLEKHA1Q9HB21 404 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 OR6C2Q9NZP2 312 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 A0A0G2JN53 185 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 LRIT2A6NDA9 550 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 MFSD2BA6NFX1 497 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 A8MUA0 341 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 PRR23D1E9PI22 279 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 K7ESM1 405 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 THY1P04216 161 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 GIPP09681 153 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 PRR23D2P0DMB1 279 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 SNRPBP14678 240 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 GJA1P17302 382 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 DRD5P21918 477 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 MPIP34949 423 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 CCR9P51686 369 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 DPTQ07507 201 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 KIAA1324Q6UXG2 1013 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 RNF113BQ8IZP6 322 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 OR6V1Q8N148 313 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 SLC39A11Q8N1S5 342 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 EID2Q8N6I1 236 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 BMPERQ8N8U9 685 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 NUP43Q8NFH3 380 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 SLC2A12Q8TD20 617 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 POF1BQ8WVV4 589 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 WBP1Q96G27 269 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 TOE1Q96GM8 510 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 C4orf36Q96KX1 117 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 KLHL15Q96M94 604 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 HS6ST2Q96MM7 605 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 TEAD3Q99594 435 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 DPYSL5Q9BPU6 564 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 MED20Q9H944 212 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 NPDC1Q9NQX5 325 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 SPHK2Q9NRA0 654 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 ZMIZ1Q9ULJ6 1067 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 CLEC4AQ9UMR7 237 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 KCNMB2Q9Y691 235 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 GLOD5A6NK44 160 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 DUXAA6NLW8 204 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 J3QLW9 94 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 L7N2F9 121 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 KPNA3O00505 521 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 BHLHE40O14503 412 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 RCBTB2O95199 551 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 ZGLP1P0C6A0 271 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 CPN1P15169 458 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF19P17023 458 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 ATF1P18846 271 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 RAP2BP61225 183 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 OVCH2Q7RTZ1 564 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 KANSL1Q7Z3B3 1105 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 AMZ2Q86W34 360 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 C17orf47Q8NEP4 570 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 GHSRQ92847 366 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 CNRIP1Q96F85 164 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 DDOQ99489 341 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 TMPRSS13Q9BYE2 586 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 REG4Q9BYZ8 158 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 SHARPINQ9H0F6 387 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 CMC2Q9NRP2 79 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 NKIRAS2Q9NYR9 191 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 SLC7A7Q9UM01 511 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 COL4A3Q01955 1670 aa13.76□□□□□ -0.21
CACNA1A-220ENST00000635988 ATP6V1G2-DDX39BF2Z307 99 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 RFXAPO00287 272 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 REM1O75628 298 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 PPM1BO75688 479 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 AGR2O95994 175 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 SBK2P0C263 348 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 PRG2P13727 222 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 ACVR1BP36896 505 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 CSNK1G2P78368 415 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 POU4F2Q12837 409 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 UBE2NLQ5JXB2 153 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF793Q6ZN11 406 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 OVCH1Q7RTY7 1134 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 RAB42Q8N4Z0 105 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 OR11G2Q8NGC1 345 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 AUTS2Q8WXX7 1259 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 ACTRT3Q9BYD9 372 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 MTHFD2LQ9H903 347 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 SIDT1Q9NXL6 827 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 PLSCR5A0PG75 271 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 ZC3H12DA2A288 527 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 LCMT2O60294 686 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 PSMB5P28074 263 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms