RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 TCEAL2Q9H3H9 227 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 CLMPQ9H6B4 373 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 POPDC2Q9HBU9 364 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SIX2Q9NPC8 291 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ACP6Q9NPH0 428 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 PPANQ9NQ55 473 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ZCCHC3Q9NUD5 404 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 INTS10Q9NVR2 710 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 TAS2R3Q9NYW6 316 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 OR6C2Q9NZP2 312 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SPASTQ9UBP0 616 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 FBXL4Q9UKA2 621 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 PRDM4Q9UKN5 801 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ELF5Q9UKW6 265 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SATB2Q9UPW6 733 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 PLEKHA6Q9Y2H5 1048 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 NSG2Q9Y328 171 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 FADS3Q9Y5Q0 445 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 POLQO75417 2590 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 TNRC6AQ8NDV7 1962 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 NUP210LQ5VU65 1888 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 UNC13CQ8NB66 2214 aa2.15□□□□□ -2.06
SMARCB1-208ENST00000634926 FER1L5A0AVI2 2057 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 A0A0D9SEW6 157 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 MACROD2A1Z1Q3 448 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 CFAP73A6NFT4 308 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM47DPA6NHR8 397 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 ARHGAP42A6NI28 874 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 F5H5T6 163 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 K7ERQ8 282 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 BMPR1BO00238 502 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 RASGRF2O14827 1237 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 KLF11O14901 512 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 CETN3O15182 167 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 NVLO15381 856 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 PSMD3O43242 534 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 AQP9O43315 295 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SSX5O60225 188 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 KIF5CO60282 957 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 STX10O60499 249 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SNAP91O60641 907 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 MAGEC1O60732 1142 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 ZG16O60844 167 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 CLDN11O75508 207 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 NEBLO76041 1014 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 ADCY5O95622 1261 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 IL1BP01584 269 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 ATP1A1P05023 1023 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 GPIP06744 558 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 LIPCP11150 499 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 EPB41P11171 864 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SKILP12757 684 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 KRT13P13646 458 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 AMD1P17707 334 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 MAT2AP31153 395 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 AKT2P31751 481 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 CCR1P32246 355 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 CHRNA3P32297 505 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 HPDP32754 393 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 MMP12P39900 470 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SYKP43405 635 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 ACADSBP45954 432 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 ASMTP46597 345 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 DUSP3P51452 185 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 HNRNPFP52597 415 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 CDH4P55283 916 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 GSCP56915 257 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC8A3P57103 927 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 OR1D5P58170 312 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SRP54P61011 504 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 YWHAEP62258 255 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 FKBP3Q00688 224 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 GALK2Q01415 458 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 PPP1R8Q12972 351 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SRSF9Q13242 221 aaKnown RBP eCLIP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 EIF3IQ13347 325 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF177Q13360 481 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 PNOCQ13519 176 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 FCN2Q15485 313 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 STX1AQ16623 288 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 CCDC40Q4G0X9 1142 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 PTPN20Q4JDL3 420 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 BRMS1LQ5PSV4 323 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 RABGAP1LQ5R372 815 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 OR6B2Q6IFH4 312 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 TRIM65Q6PJ69 517 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 DHRS11Q6UWP2 260 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 RBM43Q6ZSC3 357 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM183BPQ6ZVS7 135 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 CYP4V2Q6ZWL3 525 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 FCRLAQ7L513 359 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 ARCQ7LC44 396 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC16A9Q7RTY1 509 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 TAF8Q7Z7C8 310 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SMIM29Q86T20 159 aa2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 TRPT1Q86TN4 253 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 SETD3Q86TU7 594 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-208ENST00000634926 STHQ8IWL8 128 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms