RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 MAPK14Q16539 360 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 TIGD2Q4W5G0 525 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 GPAT3Q53EU6 434 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 TYW3Q6IPR3 259 aaKnown RBP12.78□□□□□ -0.36
PNKP-223ENST00000629179 FRRS1Q6ZNA5 592 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 HMGN2P46Q86SG4 172 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 TMCO5AQ8N6Q1 288 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 METTL25Q8N6Q8 603 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 ANKFN1Q8N957 763 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 FBXO27Q8NI29 283 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 RNASE6Q93091 150 aaKnown RBP12.78□□□□□ -0.36
PNKP-223ENST00000629179 ZG16BQ96DA0 208 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 ARSGQ96EG1 525 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 C14orf79Q96F83 325 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 THOC1Q96FV9 657 aaKnown RBP12.78□□□□□ -0.36
PNKP-223ENST00000629179 MAGEB18Q96M61 343 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 CCDC28BQ9BUN5 200 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 SAP130Q9H0E3 1048 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 TMEM185BQ9H7F4 350 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 STOML1Q9UBI4 398 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 WDR45Q9Y484 360 aa12.78□□□□□ -0.36
PNKP-223ENST00000629179 PRR14LQ5THK1 2151 aa12.77□□□□□ -0.36
PNKP-223ENST00000629179 PDZD2O15018 2839 aa12.77□□□□□ -0.36
PNKP-223ENST00000629179 A0A0J9YW62 118 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 A0A1W2PNV4 684 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 FAM234BA2RU67 622 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 KIAA0513O60268 411 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 CYP7B1O75881 506 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 H6PDO95479 791 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 ANP32DO95626 131 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 UBL4AP11441 157 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 EIF1AXP47813 144 aaKnown RBP12.77□□□□□ -0.37
PNKP-223ENST00000629179 CCR4P51679 360 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 SUMO3P55854 103 aaPredicted RBP12.77□□□□□ -0.37
PNKP-223ENST00000629179 STX1BP61266 288 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 RAC1P63000 192 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 CHRNEQ04844 493 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 MYBPHQ13203 477 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 PON3Q15166 354 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 SYPL1Q16563 259 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 SGCBQ16585 318 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 CTU2Q2VPK5 515 aaKnown RBP12.77□□□□□ -0.37
PNKP-223ENST00000629179 FBXL19-AS1Q494R0 122 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 GTDC1Q4AE62 458 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 ZNF619Q8N2I2 560 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 FNDC9Q8TBE3 224 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 ZFP90Q8TF47 636 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 LRRC46Q96FV0 321 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 ITCHQ96J02 903 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 ADGRG7Q96K78 797 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 THUMPD3Q9BV44 507 aaKnown RBP12.77□□□□□ -0.37
PNKP-223ENST00000629179 SFXN3Q9BWM7 321 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 LAT2Q9GZY6 243 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 ACBD3Q9H3P7 528 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 RMND5AQ9H871 391 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 POLE3Q9NRF9 147 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 ZNF446Q9NWS9 450 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 JKAMPQ9P055 326 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 L3MBTL1Q9Y468 752 aa12.77□□□□□ -0.37
PNKP-223ENST00000629179 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 TNFSF11O14788 317 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 CXCL13O43927 109 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 BCAS1O75363 584 aaPredicted RBP12.76□□□□□ -0.37
PNKP-223ENST00000629179 TNFSF13O75888 250 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 AQP8O94778 261 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 KRT75O95678 551 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 CSTAP01040 98 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 GUSBP08236 651 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 UBTFL6P0CB48 400 aaPredicted RBP12.76□□□□□ -0.37
PNKP-223ENST00000629179 PRKCAP17252 672 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 SHC1P29353 583 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 EIF1P41567 113 aaKnown RBP12.76□□□□□ -0.37
PNKP-223ENST00000629179 MRPL19P49406 292 aaKnown RBP12.76□□□□□ -0.37
PNKP-223ENST00000629179 ANXA11P50995 505 aaKnown RBP12.76□□□□□ -0.37
PNKP-223ENST00000629179 MVDP53602 400 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 SKP2Q13309 424 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 FGFBP1Q14512 234 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 AP1ARQ63HQ0 302 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 PPP4R4Q6NUP7 873 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 VWA1Q6PCB0 445 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 MSANTD1Q6ZTZ1 278 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 LUZP2Q86TE4 346 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 FUNDC1Q8IVP5 155 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 LILRA2Q8N149 483 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 CNEP1R1Q8N9A8 125 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 TOR1AIP2Q8NFQ8 470 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 OR5W2Q8NH69 310 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 OR10D3Q8NH80 312 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 AURKBQ96GD4 344 aaPredicted RBP12.76□□□□□ -0.37
PNKP-223ENST00000629179 LURAP1Q96LR2 239 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 ZNF559Q9BR84 538 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 QRSL1Q9H0R6 528 aaKnown RBP12.76□□□□□ -0.37
PNKP-223ENST00000629179 MCCC2Q9HCC0 563 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 KCNN3Q9UGI6 736 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 ZNF175Q9Y473 711 aa12.76□□□□□ -0.37
PNKP-223ENST00000629179 GPC6Q9Y625 555 aaPredicted RBP12.76□□□□□ -0.37
PNKP-223ENST00000629179 CLDN24A6NM45 220 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 ADAMDEC1O15204 470 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 CHRM4P08173 479 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 ZCCHC18P0CG32 403 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms