RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 SELPLGQ14242 412 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 GNA13Q14344 377 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 CAPRIN1Q14444 709 aaKnown RBP8.02□□□□□ -1.13
CHD2-216ENST00000629104 TRMT5Q32P41 509 aaKnown RBP8.02□□□□□ -1.13
CHD2-216ENST00000629104 MMEL1Q495T6 779 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 RPS26P11Q5JNZ5 115 aaPredicted RBP8.02□□□□□ -1.13
CHD2-216ENST00000629104 C1orf185Q5T7R7 199 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 PRAMEF8Q5VWM4 474 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 PRAMEF7Q5VXH5 474 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 TMEM211Q6ICI0 200 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 RPTNQ6XPR3 784 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 B3GNT6Q6ZMB0 384 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 EIF3MQ7L2H7 374 aaKnown RBP8.02□□□□□ -1.13
CHD2-216ENST00000629104 PIGWQ7Z7B1 504 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 MTDHQ86UE4 582 aaKnown RBP8.02□□□□□ -1.13
CHD2-216ENST00000629104 GTPBP8Q8N3Z3 284 aaPredicted RBP8.02□□□□□ -1.13
CHD2-216ENST00000629104 TMCO5AQ8N6Q1 288 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 METTL25Q8N6Q8 603 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 FAM71CQ8NEG0 241 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 TOR1AIP2Q8NFQ8 470 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 OR5W2Q8NH69 310 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 POC1BQ8TC44 478 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 WDR60Q8WVS4 1066 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 ARSGQ96EG1 525 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 NPAS1Q99742 590 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 TREX2Q9BQ50 279 aaPredicted RBP8.02□□□□□ -1.13
CHD2-216ENST00000629104 TTYH2Q9BSA4 534 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 TRIM8Q9BZR9 551 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 LAT2Q9GZY6 243 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 MYLK2Q9H1R3 596 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 BCL2L10Q9HD36 194 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.02□□□□□ -1.13
CHD2-216ENST00000629104 ALKBH4Q9NXW9 302 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 CAMK2AQ9UQM7 478 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 ZNF337Q9Y3M9 751 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 DOPEY2Q9Y3R5 2298 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 DOCK7Q96N67 2140 aa8.02□□□□□ -1.13
CHD2-216ENST00000629104 PCNX1Q96RV3 2341 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 CLDN24A6NM45 220 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 C5orf58C9J3I9 102 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 H0Y3Z8 333 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 H3BML4 177 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 FXYD1O00168 92 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 CYP7B1O75881 506 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 PGM3O95394 542 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 NUDT14O95848 222 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 EPPINO95925 133 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 NPPAP01160 153 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 GLI4P10075 376 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 PEPDP12955 493 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 NID1P14543 1247 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 IL7RP16871 459 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 PRKCAP17252 672 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 POU3F2P20265 443 aaPredicted RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 PSMA4P25789 261 aaKnown RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 EIF1P41567 113 aaKnown RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 CCR4P51679 360 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 SMSP52788 366 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 NUP107P57740 925 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 CDK6Q00534 326 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 SRYQ05066 204 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 FOXF1Q12946 379 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 SF3B4Q15427 424 aaKnown RBP eCLIP8.01□□□□□ -1.133e-8■■■■□ 23.3
CHD2-216ENST00000629104 TOMM34Q15785 309 aaPredicted RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 ADRM1Q16186 407 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 BCL2A1Q16548 175 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 ACSF3Q4G176 576 aaPredicted RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 NANOGP8Q6NSW7 305 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 MRGPRGQ86SM5 289 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 VRK2Q86Y07 508 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 TREML1Q86YW5 311 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 CMIPQ8IY22 773 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 PEX5LQ8IYB4 626 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 ZNF808Q8N4W9 903 aaPredicted RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 POU5F2Q8N7G0 328 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 PCYOX1LQ8NBM8 494 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 OR52P1PQ8NH57 321 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 NFKBIDQ8NI38 313 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 RP9Q8TA86 221 aaKnown RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 BBS10Q8TAM1 723 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 ZPLD1Q8TCW7 415 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 GPR119Q8TDV5 335 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 ITLN2Q8WWU7 325 aaPredicted RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 ZNF524Q96C55 264 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 LRRC58Q96CX6 371 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 RNF145Q96MT1 663 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 PSMG3-AS1Q96PY0 264 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 SLC39A3Q9BRY0 314 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 THUMPD3Q9BV44 507 aaKnown RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 TMEM38AQ9H6F2 299 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 KAT8Q9H7Z6 458 aaKnown RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 NANOGQ9H9S0 305 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 EXOSC3Q9NQT5 275 aaKnown RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 ZNF443Q9Y2A4 671 aaPredicted RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
CHD2-216ENST00000629104 AP4B1Q9Y6B7 739 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 COL12A1Q99715 3063 aa8.01□□□□□ -1.13
CHD2-216ENST00000629104 TNFSF12-TNFSF13A0A0A6YY99 330 aa8□□□□□ -1.13
CHD2-216ENST00000629104 CDHR4A6H8M9 788 aa8□□□□□ -1.13
CHD2-216ENST00000629104 CD8B2A6NJW9 211 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms