RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 OR7G2Q8NG99 324 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 TRPC4APQ8TEL6 797 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 MRRFQ96E11 262 aaKnown RBP12.13□□□□□ -0.47
SNX1-214ENST00000625244 TIGARQ9NQ88 270 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 PFDN4Q9NQP4 134 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 NTMQ9P121 344 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 UTS2RQ9UKP6 389 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 ANGPTL3Q9Y5C1 460 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 CXorf49A8MYA2 514 aaPredicted RBP12.12□□□□□ -0.47
SNX1-214ENST00000625244 POC1B-GALNT4F8VUJ3 575 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 RIPK2O43353 540 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 EFNA2O43921 213 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 UGDHO60701 494 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 GUCY1B2O75343 617 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 UTS2O95399 124 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 DAOP14920 347 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 STMN1P16949 149 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 SERPINB9P50453 376 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 VSNL1P62760 191 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 DECR1Q16698 335 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 GRAMD1BQ3KR37 738 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 EMBQ6PCB8 327 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 UGT2A3Q6UWM9 527 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 C1orf229Q6ZS94 237 aaPredicted RBP12.12□□□□□ -0.47
SNX1-214ENST00000625244 RAPH1Q70E73 1250 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 COMMD6Q7Z4G1 85 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 ISCA2Q86U28 154 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 METTL4Q8N3J2 472 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 CDYL2Q8N8U2 506 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 TMEM186Q96B77 213 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 UBXN10Q96LJ8 280 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 ZNF300Q96RE9 604 aaPredicted RBP12.12□□□□□ -0.47
SNX1-214ENST00000625244 ATOH8Q96SQ7 321 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 PKP2Q99959 881 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 FUT8Q9BYC5 575 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 UNKLQ9H9P5 680 aaKnown RBP12.12□□□□□ -0.47
SNX1-214ENST00000625244 LPAR2Q9HBW0 351 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 TAS2R9Q9NYW1 312 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 PTGDR2Q9Y5Y4 395 aa12.12□□□□□ -0.47
SNX1-214ENST00000625244 CIB4A0PJX0 185 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 RGS14O43566 566 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 PLOD3O60568 738 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 IGHV3-9P01782 118 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 ZNF41P51814 821 aaPredicted RBP12.11□□□□□ -0.47
SNX1-214ENST00000625244 UBA52P62987 128 aaKnown RBP12.11□□□□□ -0.47
SNX1-214ENST00000625244 OCLNQ16625 522 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 TCHHL1Q5QJ38 904 aaPredicted RBP12.11□□□□□ -0.47
SNX1-214ENST00000625244 SLC43A2Q8N370 569 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 L3MBTL4Q8NA19 623 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 WDR31Q8NA23 367 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 GATSQ8NAP1 163 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNX1-214ENST00000625244 STAG3L4Q8TBR4 150 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 ZNF75CPQ92670 426 aaPredicted RBP12.11□□□□□ -0.47
SNX1-214ENST00000625244 CDK15Q96Q40 435 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 GPR22Q99680 433 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 SLC6A7Q99884 636 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 SUCNR1Q9BXA5 334 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 COQ10BQ9H8M1 238 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 MED29Q9NX70 200 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 AHSPQ9NZD4 102 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 KLHL9Q9P2J3 617 aa12.11□□□□□ -0.47
SNX1-214ENST00000625244 LOC105371242A0A075B767 164 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 CCT8L1PA6NM43 557 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 ERLIN1O75477 346 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 AVPP01185 164 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 IGKV1D-16P01601 117 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 LTA4HP09960 611 aaKnown RBP12.1□□□□□ -0.47
SNX1-214ENST00000625244 MTHFD2P13995 350 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 CRABP2P29373 138 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 SERPINF1P36955 418 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 RAB10P61026 200 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 SLC18A2Q05940 514 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 GALNT1Q10472 559 aaPredicted RBP12.1□□□□□ -0.47
SNX1-214ENST00000625244 DLG1Q12959 904 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 RIN1Q13671 783 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 SLC29A2Q14542 456 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 TMEM176BQ3YBM2 270 aaPredicted RBP12.1□□□□□ -0.47
SNX1-214ENST00000625244 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 ZNF100Q8IYN0 542 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 TOR1AIP2Q8NFQ8 470 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 ACTRT2Q8TDY3 377 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 LRRC37BQ96QE4 947 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 PAFAH2Q99487 392 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 IPPKQ9H8X2 491 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 PPCSQ9HAB8 311 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 MOKQ9UQ07 419 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 ACOT9Q9Y305 439 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 GRIP1Q9Y3R0 1128 aa12.1□□□□□ -0.47
SNX1-214ENST00000625244 KERAO60938 352 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 LINGO3P0C6S8 592 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 SERPINB8P50452 374 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 IDH3GP51553 393 aaPredicted RBP12.09□□□□□ -0.47
SNX1-214ENST00000625244 FOXG1P55316 489 aaPredicted RBP12.09□□□□□ -0.47
SNX1-214ENST00000625244 SLC25A3Q00325 362 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 RASGEF1BQ0VAM2 473 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms