RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 SSR4P51571 173 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 RAD23AP54725 363 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 RPP38P78345 283 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 Q0VFX4 171 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 AIMP2Q13155 320 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 SKP2Q13309 424 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 OR1Q1Q15612 314 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 ZNF791Q3KP31 576 aaPredicted RBP13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 TBC1D25Q3MII6 688 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 NHSL2Q5HYW2 709 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 DCAF10Q5QP82 559 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 KDM4DQ6B0I6 523 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 DESI1Q6ICB0 168 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 TMEM81Q6P7N7 255 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 ATG16L2Q8NAA4 619 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 THAP4Q8WY91 577 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 SECISBP2Q96T21 854 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 BARD1Q99728 777 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 PRR14Q9BWN1 585 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 CDCP1Q9H5V8 836 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 SMURF2Q9HAU4 748 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 ATP13A2Q9NQ11 1180 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 MAN2C1Q9NTJ4 1040 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 KIF17Q9P2E2 1029 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 CFAP54Q96N23 3096 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 TRBV4-1A0A0J9YWV2 114 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 SH3PXD2BA1X283 911 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 DLGAP1O14490 977 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 CDH2P19022 906 aaPredicted RBP13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 RNF144AP50876 292 aaPredicted RBP13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 DAPP51397 102 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 COPZ1P61923 177 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 LAPTM4AQ15012 233 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 GDF7Q7Z4P5 450 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 MARCH3Q86UD3 253 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 RNF217Q8TC41 542 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 GRHL3Q8TE85 626 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 ASB15Q8WXK1 588 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 NODALQ96S42 347 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 FEVQ99581 238 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 CTPS2Q9NRF8 586 aa13.02□□□□□ -0.32
CLTCL1-212ENST00000622493 ADAM11O75078 769 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 FUT4P22083 530 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 IGFBP5P24593 272 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 IFNGR2P38484 337 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 SOX3P41225 446 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 C17orf67Q0P5P2 114 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 MERTKQ12866 999 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 SNTA1Q13424 505 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 MEP1AQ16819 746 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 CRTC2Q53ET0 693 aaPredicted RBP13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 FOXB2Q5VYV0 432 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 ZNF770Q6IQ21 691 aaPredicted RBP13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 PODNL1Q6PEZ8 512 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 ULK3Q6PHR2 472 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 RRM2BQ7LG56 351 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 TMEM156Q8N614 296 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 GATSQ8NAP1 163 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 CLEC1AQ8NC01 280 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 OR5M3Q8NGP4 307 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 DNAJA4Q8WW22 397 aaPredicted RBP13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 ACOT11Q8WXI4 607 aaPredicted RBP13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 ZNF556Q9HAH1 456 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 SDHAF3Q9NRP4 125 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 TEKT2Q9UIF3 430 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 TMEFF2Q9UIK5 374 aaPredicted RBP13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 SLC7A7Q9UM01 511 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 MGAT4BQ9UQ53 548 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 CARD8Q9Y2G2 431 aa13.02□□□□□ -0.33
CLTCL1-212ENST00000622493 A0A0B4J2E0 115 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 A0A1B0GX12 115 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 CDK2AP1O14519 115 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 DENRO43583 198 aaKnown RBP13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 HCRTR2O43614 444 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 CHP2O43745 196 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 ADAP00813 363 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 THY1P04216 161 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 GSTT1P30711 240 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 RYKP34925 604 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 RRADP55042 308 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 ZNF117Q03924 483 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 FOXC1Q12948 553 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 CBLN3Q6UW01 205 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 RNF113BQ8IZP6 322 aaKnown RBP13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 OR10G3Q8NGC4 313 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 PSMF1Q92530 271 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 TFAP2CQ92754 450 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 THOC3Q96J01 351 aaKnown RBP13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 SGCZQ96LD1 299 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 CCNL2Q96S94 520 aaPredicted RBP13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 ADI1Q9BV57 179 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 RTN4RQ9BZR6 473 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 KRT84Q9NSB2 600 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 NDUFA13Q9P0J0 144 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 RPS6KB2Q9UBS0 482 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 ENOPH1Q9UHY7 261 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 ICAM5Q9UMF0 924 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 NTNG1Q9Y2I2 539 aa13.01□□□□□ -0.33
CLTCL1-212ENST00000622493 AP4B1Q9Y6B7 739 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms