RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 ARID1BQ8NFD5 2236 aaPredicted RBP16.19■□□□□ 0.18
FAM3A-222ENST00000621967 ZFHX2Q9C0A1 2572 aaPredicted RBP16.18■□□□□ 0.18
FAM3A-222ENST00000621967 A8MU76 341 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 LRRTM2O43300 516 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 LALBAP00709 142 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 ZNF888P0CJ79 500 aaPredicted RBP16.18■□□□□ 0.18
FAM3A-222ENST00000621967 PPM1FP49593 454 aaPredicted RBP16.18■□□□□ 0.18
FAM3A-222ENST00000621967 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.18■□□□□ 0.18
FAM3A-222ENST00000621967 SHFQ7M4L6 423 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 NRMQ8IXM6 262 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 OR2L13Q8N349 312 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 AP3S1Q92572 193 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 ZNF486Q96H40 463 aaPredicted RBP16.18■□□□□ 0.18
FAM3A-222ENST00000621967 COQ7Q99807 217 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.18■□□□□ 0.18
FAM3A-222ENST00000621967 TWSG1Q9GZX9 223 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 MTHFD2LQ9H903 347 aaPredicted RBP16.18■□□□□ 0.18
FAM3A-222ENST00000621967 TMEM165Q9HC07 324 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 KCMF1Q9P0J7 381 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 CDH10Q9Y6N8 788 aa16.18■□□□□ 0.18
FAM3A-222ENST00000621967 POLR1CO15160 346 aaPredicted RBP16.17■□□□□ 0.18
FAM3A-222ENST00000621967 NUDT21O43809 227 aaKnown RBP16.17■□□□□ 0.18
FAM3A-222ENST00000621967 CSF3P09919 207 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 SMIM10L1P0DMW3 83 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 MYF5P13349 255 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 GLB1P16278 677 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 GPR4P46093 362 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 SNRPNP63162 240 aaKnown RBP16.17■□□□□ 0.18
FAM3A-222ENST00000621967 DAB2P98082 770 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 HOXC5Q00444 222 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 RGS1Q08116 209 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 DSG2Q14126 1118 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 ARHGAP11BQ3KRB8 267 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 RSBN1Q5VWQ0 802 aaPredicted RBP16.17■□□□□ 0.18
FAM3A-222ENST00000621967 TYW3Q6IPR3 259 aaKnown RBP16.17■□□□□ 0.18
FAM3A-222ENST00000621967 ASPGQ86U10 573 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 RAB43Q86YS6 212 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 SAMD14Q8IZD0 417 aaPredicted RBP16.17■□□□□ 0.18
FAM3A-222ENST00000621967 ARIH2OSQ8N7S6 290 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 OR4E2Q8NGC2 313 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 CDS1Q92903 461 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 TM4SF19Q96DZ7 209 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 SMIM10Q96HG1 83 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 DIRAS2Q96HU8 199 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 SRMSQ9H3Y6 488 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 NEK6Q9HC98 313 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 EVA1BQ9NVM1 165 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 TOR4AQ9NXH8 423 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 LRIT1Q9P2V4 623 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 RNF215Q9Y6U7 377 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 FABP12A6NFH5 140 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 C4orf47A7E2U8 309 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 BTN3A3O00478 584 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 HTR1FP30939 366 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 SOX18P35713 384 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 NR4A2P43354 598 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 RPS5P46782 204 aaKnown RBP16.17■□□□□ 0.18
FAM3A-222ENST00000621967 NKX2-5P52952 324 aaPredicted RBP16.17■□□□□ 0.18
FAM3A-222ENST00000621967 IFITM2Q01629 132 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 ZNF836Q6ZNA1 936 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 ASCL5Q7RTU5 278 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 LHFPL3Q86UP9 236 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 OR4F15Q8NGB8 312 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 OR6C4Q8NGE1 309 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 OR52N1Q8NH53 320 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 FLVCR1-AS1Q8TAF5 88 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 RHBDD1Q8TEB9 315 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 TMEM255BQ8WV15 326 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 FCRL4Q96PJ5 515 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 TEX12Q9BXU0 123 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 PRDM9Q9NQV7 894 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 PHF11Q9UIL8 331 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 ZNF221Q9UK13 617 aa16.17■□□□□ 0.18
FAM3A-222ENST00000621967 PIP5K1CO60331 668 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 CH25HO95992 272 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 TRAPPC2P0DI81 140 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 TRAPPC2BP0DI82 140 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 ZNF136P52737 540 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 DGLUCYQ7Z3D6 616 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 PEX5LQ8IYB4 626 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 SERINC2Q96SA4 455 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 SLC22A4Q9H015 551 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 RERGLQ9H628 205 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 UCK1Q9HA47 277 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 CBLCQ9ULV8 474 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 CLCA2Q9UQC9 943 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 WDR45Q9Y484 360 aa16.16■□□□□ 0.18
FAM3A-222ENST00000621967 CPED1A4D0V7 1026 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 LILRA5A6NI73 299 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 AKAP8O43823 692 aaKnown RBP16.15■□□□□ 0.18
FAM3A-222ENST00000621967 COQ9O75208 318 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 THBS1P07996 1170 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 SLC35G6P0C7Q6 338 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 CPN2P22792 545 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 PPP3R1P63098 170 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 EEF1A1P68104 462 aaKnown RBP16.15■□□□□ 0.18
FAM3A-222ENST00000621967 DUSP8Q13202 625 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 EXOSC6Q5RKV6 272 aaKnown RBP16.15■□□□□ 0.18
FAM3A-222ENST00000621967 ATAD3CQ5T2N8 411 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 FBXO42Q6P3S6 717 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms