RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 SP140LQ9H930 580 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 PRDM9Q9NQV7 894 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 GPR83Q9NYM4 423 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SEC14L4Q9UDX3 406 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 ICKQ9UPZ9 632 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 PCDHGA6Q9Y5G7 932 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SDK2Q58EX2 2172 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 H0YAE9 185 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 SLC2A2P11168 524 aaPredicted RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 CPOXP36551 454 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 CYB561P49447 251 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 STARP49675 285 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 GLO1Q04760 184 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 C4orf46Q504U0 113 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 ENTPD8Q5MY95 495 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 ATAD3CQ5T2N8 411 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 SLC18B1Q6NT16 456 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 TRIM46Q7Z4K8 759 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 TMEM150AQ86TG1 271 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 FBXL6Q8N531 539 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 DTX3Q8N9I9 347 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 DRAXINQ8NBI3 349 aaPredicted RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 OR8J2Q8NGG1 315 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 PRRC1Q96M27 445 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 SLC46A1Q96NT5 459 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 ULBP2Q9BZM5 246 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 OR52A5Q9H2C5 316 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 INIPQ9NRY2 104 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 TMEM181Q9P2C4 612 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 TBC1D24Q9ULP9 559 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 LOXL2Q9Y4K0 774 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 BCORQ6W2J9 1755 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 TET1Q8NFU7 2136 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 NINQ8N4C6 2090 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 PRAMEF10O60809 474 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 DDAH2O95865 285 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 GSTT2BP0CG30 244 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 GM2AP17900 193 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 RPS5P46782 204 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 CAPZBP47756 277 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 HSD17B7P56937 341 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 OR1Q1Q15612 314 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 OCLNQ16625 522 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 MICAQ29983 383 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 WBP2NLQ6ICG8 309 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 C6orf15Q6UXA7 325 aaPredicted RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 LIMS2Q7Z4I7 341 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 ADGRG5Q8IZF4 528 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 NUDT8Q8WV74 236 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 NANOS1Q8WY41 292 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 THRSPQ92748 146 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 FKBP10Q96AY3 582 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 MS4A6EQ96DS6 147 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 S100A16Q96FQ6 103 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 THOC3Q96J01 351 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 GMPR2Q9P2T1 348 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 ZNF639Q9UID6 485 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 MMACHCQ9Y4U1 282 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 ASB1Q9Y576 335 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 SMAD9O15198 467 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 PRKNO60260 465 aaPredicted RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 LCMT2O60294 686 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 MRPL33O75394 65 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 PIAS2O75928 621 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 PSKH1P11801 424 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 COL9A1P20849 921 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 DLSTP36957 453 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 GLP1RP43220 463 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 PITPNAQ00169 270 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 HNRNPA0Q13151 305 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 TRMT12Q53H54 448 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 CGB2Q6NT52 195 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 SFXN5Q8TD22 340 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 UBTD2Q8WUN7 234 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 RSPRY1Q96DX4 576 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 ELP4Q96EB1 424 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 SLC29A1Q99808 456 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 ENKD1Q9H0I2 346 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 CDCP1Q9H5V8 836 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 FARSAQ9Y285 508 aaKnown RBP8.62□□□□□ -1.03
GGA3-223ENST00000621870 SHROOM3Q8TF72 1996 aa8.62□□□□□ -1.03
GGA3-223ENST00000621870 TEX13DA0A0J9YY54 714 aaPredicted RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 C5orf51A6NDU8 294 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 OR2W5A6NFC9 320 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 CD8B2A6NJW9 211 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 EEF1E1-BLOC1S5C9J1V9 151 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 NRG2O14511 850 aaPredicted RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 EEF1E1O43324 174 aaKnown RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 CCNKO75909 580 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 WDPCPO95876 746 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 TMEM225BP0DP42 221 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 CD8BP10966 210 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 MSX1P28360 303 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 TACR3P29371 465 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 CRABP1P29762 137 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 IDUAP35475 653 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 THOC7Q6I9Y2 204 aaKnown RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 C22orf42Q6IC83 251 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 PODNL1Q6PEZ8 512 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms