RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 BCL2A1Q16548 175 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 RPS26P11Q5JNZ5 115 aaPredicted RBP16.53■□□□□ 0.24
LITAF-220ENST00000620789 PRAMEF8Q5VWM4 474 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 PRAMEF7Q5VXH5 474 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 CMIPQ8IY22 773 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 PEX5LQ8IYB4 626 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 GTPBP8Q8N3Z3 284 aaPredicted RBP16.53■□□□□ 0.24
LITAF-220ENST00000620789 METTL25Q8N6Q8 603 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 GPR119Q8TDV5 335 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 WDR60Q8WVS4 1066 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 ARSGQ96EG1 525 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 THUMPD3Q9BV44 507 aaKnown RBP16.53■□□□□ 0.24
LITAF-220ENST00000620789 CCDC106Q9BWC9 280 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 TRIM8Q9BZR9 551 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 BCL2L10Q9HD36 194 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 ZNF337Q9Y3M9 751 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 UTP20O75691 2785 aaKnown RBP16.52■□□□□ 0.24
LITAF-220ENST00000620789 CLDN24A6NM45 220 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 C5orf58C9J3I9 102 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 DNAJA2O60884 412 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 BCAS1O75363 584 aaPredicted RBP16.52■□□□□ 0.24
LITAF-220ENST00000620789 CYP7B1O75881 506 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 NPPAP01160 153 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 PEPDP12955 493 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 NID1P14543 1247 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 IL7RP16871 459 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 POU3F2P20265 443 aaPredicted RBP16.52■□□□□ 0.24
LITAF-220ENST00000620789 CCR4P51679 360 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 SMSP52788 366 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 MTPNP58546 118 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 PLAURQ03405 335 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 CBFBQ13951 182 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 SELPLGQ14242 412 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 ACSF3Q4G176 576 aaPredicted RBP16.52■□□□□ 0.24
LITAF-220ENST00000620789 PCYOX1LQ8NBM8 494 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 RP9Q8TA86 221 aaKnown RBP16.52■□□□□ 0.24
LITAF-220ENST00000620789 BBS10Q8TAM1 723 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 ITLN2Q8WWU7 325 aaPredicted RBP16.52■□□□□ 0.24
LITAF-220ENST00000620789 NPAS1Q99742 590 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 TTYH2Q9BSA4 534 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 MYLK2Q9H1R3 596 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 TMEM38AQ9H6F2 299 aa16.52■□□□□ 0.24
LITAF-220ENST00000620789 SPTAN1Q13813 2472 aaKnown RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 NCOA6Q14686 2063 aaPredicted RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 H0Y3Z8 333 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 H3BML4 177 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 FXYD1O00168 92 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 PGM3O95394 542 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 GLI4P10075 376 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 PSMA4P25789 261 aaKnown RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 EIF1P41567 113 aaKnown RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 NUP107P57740 925 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 CDK6Q00534 326 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 SRYQ05066 204 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 PMPCAQ10713 525 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 TOMM34Q15785 309 aaPredicted RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 ADRM1Q16186 407 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 LIN52Q52LA3 116 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 NANOGP8Q6NSW7 305 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 PIGWQ7Z7B1 504 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 MRGPRGQ86SM5 289 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 ZNF808Q8N4W9 903 aaPredicted RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 POU5F2Q8N7G0 328 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 OR52P1PQ8NH57 321 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 NFKBIDQ8NI38 313 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 POC1BQ8TC44 478 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 ZPLD1Q8TCW7 415 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 LRRC58Q96CX6 371 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 RNF145Q96MT1 663 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 PSMG3-AS1Q96PY0 264 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 SLC39A3Q9BRY0 314 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 KAT8Q9H7Z6 458 aaKnown RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 NANOGQ9H9S0 305 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 EXOSC3Q9NQT5 275 aaKnown RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 GPC6Q9Y625 555 aaPredicted RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 AP4B1Q9Y6B7 739 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 PHF3Q92576 2039 aaKnown RBP16.51■□□□□ 0.23
LITAF-220ENST00000620789 PTPN13Q12923 2485 aa16.51■□□□□ 0.23
LITAF-220ENST00000620789 EPPINO95925 133 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 THBS1P07996 1170 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 COX4I1P13073 169 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 PRKCAP17252 672 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 PGCP20142 388 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 AGAP20933 346 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 ADH6P28332 368 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 FOXF1Q12946 379 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 SCARB2Q14108 478 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 QPRTQ15274 297 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 MRPL2Q5T653 305 aaKnown RBP16.5■□□□□ 0.23
LITAF-220ENST00000620789 NSUN5P2Q63ZY6 315 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 REEP3Q6NUK4 255 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 ZNF836Q6ZNA1 936 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 VRK2Q86Y07 508 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 TREML1Q86YW5 311 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 LACC1Q8IV20 430 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 UBQLNLQ8IYU4 475 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 CNOT9Q92600 299 aaKnown RBP16.5■□□□□ 0.23
LITAF-220ENST00000620789 RND1Q92730 232 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 RCN3Q96D15 328 aa16.5■□□□□ 0.23
LITAF-220ENST00000620789 TUBA1CQ9BQE3 449 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms