RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 J3QLW9 94 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 CFDP00746 253 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 WNT1P04628 370 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC35G4P0C7Q5 338 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 SNRPBP14678 240 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF19P17023 458 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ATF1P18846 271 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ERVK-21P61565 698 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF85Q03923 595 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 KLF9Q13886 244 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 CEBPEQ15744 281 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ACSM3Q53FZ2 586 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ADAMTSL4Q6UY14 1074 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 WDR88Q6ZMY6 472 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 RTL4Q6ZR62 310 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC51BQ86UW2 128 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 LNX2Q8N448 690 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 OR52L1Q8NGH7 329 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 CXorf40AQ8TE69 158 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 MSANTD3Q96H12 275 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 C12orf66Q96MD2 445 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 C7orf50Q9BRJ6 194 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 LAMA2P24043 3122 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 LRRN3E7EW58 273 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 CDK2AP1O14519 115 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 IL9P15248 144 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 SOX9P48436 509 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 OR12D2P58182 307 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 VSX2P58304 361 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 TAS2R43P59537 309 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 POU6F2P78424 691 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 DHCR24Q15392 516 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 MLF2Q15773 248 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 TCEAL5Q5H9L2 206 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 DMKNQ6E0U4 476 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 FAM111BQ6SJ93 734 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 ESPNLQ6ZVH7 1005 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 TEX19Q8NA77 164 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC16A11Q8NCK7 471 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 PFN4Q8NHR9 129 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 HS6ST2Q96MM7 605 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 TEAD3Q99594 435 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 LRRN3Q9H3W5 708 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 C20orf141Q9NUB4 165 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 PRELID1Q9Y255 219 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 MRPS7Q9Y2R9 242 aaKnown RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 MUC22E2RYF6 1773 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 CENPVL1A0A0U1RR11 272 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 CDHR4A6H8M9 788 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC22A31A6NKX4 558 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 RRASP10301 218 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 TEAD1P28347 426 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 PITPNAQ00169 270 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 CRYZQ08257 329 aaKnown RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 GET4Q7L5D6 327 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 ADAMTS15Q8TE58 950 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 SMAP2Q8WU79 429 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 OR8D1Q8WZ84 308 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 CDS1Q92903 461 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 DACT3Q96B18 629 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 RADILQ96JH8 1075 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 FERD3LQ96RJ6 166 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 CDCP1Q9H5V8 836 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 SYNPO2LQ9H987 977 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 ADGRL4Q9HBW9 690 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 CMC2Q9NRP2 79 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 COQ3Q9NZJ6 369 aa18.17■□□□□ 0.5
PDLIM3-212ENST00000620787 TRABD2BA6NFA1 517 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 SSNA1O43805 119 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 FGF18O76093 207 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 HPXP02790 462 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 RPS7P62081 194 aaKnown RBP18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 SEZ6L2Q6UXD5 910 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 THSD4Q6ZMP0 1018 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC44A3Q8N4M1 653 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 OR2L5Q8NG80 312 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 OR5J2Q8NH18 312 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 OR56B4Q8NH76 319 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 RPLP0P6Q8NHW5 317 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 THAP4Q8WY91 577 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 OTUB2Q96DC9 234 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 CD180Q99467 661 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 GSDMCQ9BYG8 508 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 BEX1Q9HBH7 125 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC6A20Q9NP91 592 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 LAMA3Q16787 3333 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 ANTXRLA6NF34 631 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 PRRT4C9JH25 899 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 PRR23D1E9PI22 279 aaPredicted RBP18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 GSTZ1O43708 216 aaPredicted RBP18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 CXCL14O95715 111 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 PCCBP05166 539 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 ADH1AP07327 375 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 SBK2P0C263 348 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 PRR23D2P0DMB1 279 aaPredicted RBP18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 NOS3P29474 1203 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 SELENOPP49908 381 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 CDK3Q00526 305 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 TAGLNQ01995 201 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms