RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 GSTM3P21266 225 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 CD80P33681 288 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 JAG1P78504 1218 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 GALNT2Q10471 571 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNHIT3Q15649 155 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 FAM69AQ5T7M9 428 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 KDELC1Q6UW63 502 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM205Q6UW68 189 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF283Q8N7M2 679 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 FOXJ1Q92949 421 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 YIPF5Q969M3 257 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OR5B12Q96R08 314 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 CD180Q99467 661 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF736B4DX44 427 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PI15O43692 258 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 FAM27D1Q5T7N8 215 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 CCDC54Q8NEL0 328 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OR5M1Q8NGP8 315 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PROKR1Q8TCW9 393 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 WDR89Q96FK6 387 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 HCAR1Q9BXC0 346 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RXFP3Q9NSD7 469 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 TRAV27A0A087WT01 109 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 UMAD1C9J7I0 102 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ADH1CP00326 375 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SCAPQ12770 1279 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 INTS6LQ5JSJ4 861 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SLC35F2Q8IXU6 374 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 UCN3Q969E3 161 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 UBE2E3Q969T4 207 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 NUDT9Q9BW91 350 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SLC7A7Q9UM01 511 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 CSAG2Q9Y5P2 127 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SPACA6W5XKT8 324 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF816-ZNF321PA0A0X1KG74 233 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PSMB1P20618 241 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RFX2P48378 723 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 BACE1P56817 501 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 LGALSLQ3ZCW2 172 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 VHLLQ6RSH7 139 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 NPAS3Q8IXF0 933 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF321PQ8N8H1 164 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ABHD4Q8TB40 342 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 C8orf33Q9H7E9 229 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 FBXO10Q9UK96 956 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 MAFO75444 373 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PPP1R3DO95685 299 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 F2P00734 622 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 IL1AP01583 271 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PTHLHP12272 177 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SLC25A35Q3KQZ1 300 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 KDM4DQ6B0I6 523 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SLC27A4Q6P1M0 643 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PGAP1Q75T13 922 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ERASQ7Z444 233 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OR2AJ1Q8NGZ0 328 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 MCHR1Q99705 422 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF251Q9BRH9 671 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 P2RX2Q9UBL9 471 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 KIF25Q9UIL4 384 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 CDHR4A6H8M9 788 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 IGSF6O95976 241 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ADCYAP1R1P41586 468 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RAP2BP61225 183 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 POLR2GP62487 172 aaKnown RBP eCLIP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 C19orf57Q0VDD7 668 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RBMS2Q15434 407 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 GGNBP1Q5YKI7 109 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 MEX3BQ6ZN04 569 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ACBD7Q8N6N7 88 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF629Q9UEG4 869 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 NSG1P42857 185 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 POU3F4P49335 361 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TAF10Q12962 218 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 SGCAQ16586 387 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 RNF212Q495C1 297 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 PRSS58Q8IYP2 241 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 OR14A16Q8NHC5 309 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 BOCQ9BWV1 1114 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 A0A1B0GVM2 712 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TCRBV5S2A0A599 114 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TSPAN11A1L157 253 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 GPR37O15354 613 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 HOXD8P13378 290 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 PTGER3P43115 390 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 DOC2AQ14183 400 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 DPY19L2P1Q6NXN4 242 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 FBXO46Q6PJ61 603 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 UNC93AQ86WB7 457 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 OR52N1Q8NH53 320 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 CHTF18Q8WVB6 975 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 CDC6Q99741 560 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 HEBP1Q9NRV9 189 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 PNO1Q9NRX1 252 aaKnown RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF701Q9NV72 531 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM82A0PJX8 343 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 OR6C6A6NF89 314 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 PFKMP08237 780 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 PSMA3P25788 255 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 CORO1AP31146 461 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms