RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 PRMT3O60678 531 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 PDYNP01213 254 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 HLA-DPB1P04440 258 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 SLC2A1P11166 492 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 RNH1P13489 461 aaKnown RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 ADRB3P13945 408 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 DRD5P21918 477 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 HTR2AP28223 471 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 DDTP30046 118 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 CHI3L1P36222 383 aaPredicted RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 LIMS1P48059 325 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 SLC11A1P49279 550 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 RAB5CP51148 216 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 HMGA2P52926 109 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 CDH12P55289 794 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 SPIBQ01892 262 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 TAF10Q12962 218 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 KLF9Q13886 244 aaPredicted RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 BOP1Q14137 746 aaKnown RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 ARHGEF7Q14155 803 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 PYY3Q5JQD4 70 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 FAM69AQ5T7M9 428 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 LIPJQ5W064 366 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 HBMQ6B0K9 141 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 ZNF613Q6PF04 617 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 NCEH1Q6PIU2 408 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 MBOAT1Q6ZNC8 495 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 MSANTD1Q6ZTZ1 278 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 SLC29A4Q7RTT9 530 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 MARCH9Q86YJ5 346 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 FAM98AQ8NCA5 519 aaKnown RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 MARS2Q96GW9 593 aaKnown RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 PBX4Q9BYU1 374 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 GPR61Q9BZJ8 451 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 C1GALT1Q9NS00 363 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 DZANK1Q9NVP4 752 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 MARCH5Q9NX47 278 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 GREB1Q4ZG55 1949 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 SNRPGP15A8MWD9 76 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 LRRTM2O43300 516 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CPSF4O95639 269 aaKnown RBP9.67□□□□□ -0.86
VPS11-207ENST00000620429 ANKRD34CP0C6C1 535 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 PRPS2P11908 318 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 ACPPP15309 386 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 PAX1P15863 534 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 HIST1H1BP16401 226 aaKnown RBP9.67□□□□□ -0.86
VPS11-207ENST00000620429 TACR2P21452 398 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CRABP1P29762 137 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CTSOP43234 321 aaPredicted RBP9.67□□□□□ -0.86
VPS11-207ENST00000620429 KIR3DL1P43629 444 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 MTNR1BP49286 362 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 POU4F2Q12837 409 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 ATPAF1Q5TC12 328 aaPredicted RBP9.67□□□□□ -0.86
VPS11-207ENST00000620429 C12orf73Q69YU5 71 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 ZCCHC12Q6PEW1 402 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 PRSS55Q6UWB4 352 aaPredicted RBP9.67□□□□□ -0.86
VPS11-207ENST00000620429 RTL10Q7L3V2 364 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CFAP206Q8IYR0 622 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 OR8J1Q8NGP2 316 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 LKAAEAR1Q8TD35 194 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 ACOT11Q8WXI4 607 aaPredicted RBP9.67□□□□□ -0.86
VPS11-207ENST00000620429 FBXO32Q969P5 355 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 GTPBP3Q969Y2 492 aaKnown RBP9.67□□□□□ -0.86
VPS11-207ENST00000620429 SLC25A28Q96A46 364 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 FBXO17Q96EF6 278 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 PHYHIPLQ96FC7 376 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 MESP1Q9BRJ9 268 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 TLR8Q9NR97 1041 aaKnown RBP9.67□□□□□ -0.86
VPS11-207ENST00000620429 SMCO4Q9NRQ5 59 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 F5H5T6 163 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 GABRPO00591 440 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CLDN9O95484 217 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 MT-ND4P03905 459 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CD3GP09693 182 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 RPS2P15880 293 aaKnown RBP9.67□□□□□ -0.86
VPS11-207ENST00000620429 SDC1P18827 310 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 GALP22466 123 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 AQP1P29972 269 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 GMFBP60983 142 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 RAB8AP61006 207 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 SHC2P98077 582 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 SKP2Q13309 424 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 KIAA1161Q6NSJ0 714 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 BAIAP2L2Q6UXY1 529 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CEACAM20Q6UY09 585 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CLDN19Q8N6F1 224 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 ZSCAN1Q8NBB4 408 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 OR52J3Q8NH60 311 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 HIST1H2BAQ96A08 127 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 RGMAQ96B86 450 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 POM121Q96HA1 1249 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 APOLD1Q96LR9 279 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CASD1Q96PB1 797 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 BOCQ9BWV1 1114 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 ADGRE3Q9BY15 652 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 CRLF2Q9HC73 371 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 THSD1Q9NS62 852 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 ZSCAN32Q9NX65 697 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
VPS11-207ENST00000620429 PCDHB1Q9Y5F3 818 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms