RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CATP04040 527 aaKnown RBP11.25□□□□□ -0.61
SRRT-216ENST00000618262 LINC00614P0C842 121 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 PVRP15151 417 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 MAGEB1P43366 347 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 SOX8P57073 446 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 SLAQ13239 276 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 SNTB1Q13884 538 aaKnown RBP11.25□□□□□ -0.61
SRRT-216ENST00000618262 RBMS2Q15434 407 aaKnown RBP11.25□□□□□ -0.61
SRRT-216ENST00000618262 CTF1Q16619 201 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 HKDC1Q2TB90 917 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 COLEC12Q5KU26 742 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 TMEM236Q5W0B7 351 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 FRMPD2BQ6IN97 320 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 C19orf18Q8NEA5 215 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 OR10H5Q8NGA6 315 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 PHOSPHO1Q8TCT1 267 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 ZNF480Q8WV37 535 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 LCN9Q8WX39 176 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 ISL2Q96A47 359 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 PPIL3Q9H2H8 161 aaKnown RBP11.25□□□□□ -0.61
SRRT-216ENST00000618262 STOX2Q9P2F5 926 aaPredicted RBP11.25□□□□□ -0.61
SRRT-216ENST00000618262 CCDC154A6NI56 674 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 QSOX1O00391 747 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 LGI1O95970 557 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 POLR2IP36954 125 aaKnown RBP11.25□□□□□ -0.61
SRRT-216ENST00000618262 GPR143P51810 404 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 BST1Q10588 318 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 USF2Q15853 346 aaPredicted RBP11.25□□□□□ -0.61
SRRT-216ENST00000618262 RBBP7Q16576 425 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 ZBTB49Q6ZSB9 765 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 LHFPL4Q7Z7J7 247 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 PPP1R3BQ86XI6 285 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 SLC35F3Q8IY50 421 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 GPBAR1Q8TDU6 330 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 RPL3LQ92901 407 aaKnown RBP11.25□□□□□ -0.61
SRRT-216ENST00000618262 GCDHQ92947 438 aaPredicted RBP11.25□□□□□ -0.61
SRRT-216ENST00000618262 PARD6AQ9NPB6 346 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 SIRT7Q9NRC8 400 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 TAC3Q9UHF0 121 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 ADAM30Q9UKF2 790 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 USP22Q9UPT9 525 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 RNF215Q9Y6U7 377 aa11.25□□□□□ -0.61
SRRT-216ENST00000618262 A6NLC8 198 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 ISM1B1AKI9 464 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 STX16O14662 325 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 TNFRSF10CO14798 259 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 KCNAB3O43448 404 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 OR10H2O60403 315 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 MATN4O95460 622 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 BPGMP07738 259 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 RAB3BP20337 219 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 PAICSP22234 425 aaKnown RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 IMPA1P29218 277 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 OR1D5P58170 312 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 AGTRAPQ6RW13 159 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 IL20RBQ6UXL0 311 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 GPR155Q7Z3F1 870 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 THOC6Q86W42 341 aaKnown RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 CCDC71Q8IV32 467 aaPredicted RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 SFRP1Q8N474 314 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 LINC01555Q8NAE3 123 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 LINC00615Q96LM1 132 aaPredicted RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 TIMM29Q9BSF4 260 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 OR10A4Q9H209 315 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 ACTL8Q9H568 366 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 NOL11Q9H8H0 719 aaKnown RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 GHRLQ9UBU3 117 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 PLEKHA6Q9Y2H5 1048 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 ZFC3H1O60293 1989 aaKnown RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 ATP6AP2A0A1C7CYW4 349 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 AGAP5A6NIR3 686 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 STX11O75558 287 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 ATP6AP2O75787 350 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 ATP5A1P25705 553 aaKnown RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 RORAP35398 523 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 FOXA1P55317 472 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 MTFR2Q6P444 385 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 RASSF6Q6ZTQ3 369 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 FAM92BQ6ZTR7 304 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 SUMF1Q8NBK3 374 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 SETD9Q8NE22 299 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 OR5K2Q8NHB8 316 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 GPR137Q96N19 417 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 ADI1Q9BV57 179 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 NUAK2Q9H093 628 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 GSX1Q9H4S2 264 aaPredicted RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 ZBTB26Q9HCK0 441 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 LRIT1Q9P2V4 623 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 SUSD2Q9UGT4 822 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 C3orf18Q9UK00 162 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 MKLN1Q9UL63 735 aa11.24□□□□□ -0.61
SRRT-216ENST00000618262 PRPF19Q9UMS4 504 aaKnown RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 MRPS2Q9Y399 296 aaKnown RBP11.24□□□□□ -0.61
SRRT-216ENST00000618262 FEZF1A0PJY2 475 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 PGPEP1LA6NFU8 196 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 C4orf47A7E2U8 309 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 UBFD1O14562 309 aaKnown RBP11.23□□□□□ -0.61
SRRT-216ENST00000618262 PHYHO14832 338 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 GPRIN2O60269 458 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms