RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PHF10Q8WUB8 498 aaKnown RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 SPACA9Q96E40 222 aaPredicted RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 DHRS1Q96LJ7 313 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 PIP5K1AQ99755 562 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 LIN28AQ9H9Z2 209 aaKnown RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 EXOSC3Q9NQT5 275 aaKnown RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 DNAJB12Q9NXW2 375 aaKnown RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 FLRT3Q9NZU0 649 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 TESQ9UGI8 421 aaKnown RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 CLDN24A6NM45 220 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 MKRN2OSH3BPM6 223 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 CDK2AP1O14519 115 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 FADS1O60427 444 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 HPGDP15428 266 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 EVI2BP34910 448 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 PTDSS1P48651 473 aaKnown RBP10.46□□□□□ -0.73
SLIRP-212ENST00000613856 SSR4P51571 173 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF136P52737 540 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 RRADP55042 308 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 SOX8P57073 446 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 TRIP10Q15642 601 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF791Q3KP31 576 aaPredicted RBP10.46□□□□□ -0.73
SLIRP-212ENST00000613856 AMIGO2Q86SJ2 522 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 RANBP3LQ86VV4 465 aaPredicted RBP10.46□□□□□ -0.73
SLIRP-212ENST00000613856 LACC1Q8IV20 430 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 MISPQ8IVT2 679 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 GPALPP1Q8IXQ4 340 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF440Q8IYI8 595 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF614Q8N883 585 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 POGLUT1Q8NBL1 392 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 CATSPER1Q8NEC5 780 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 OR6T1Q8NGN1 323 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 VANGL1Q8TAA9 524 aaPredicted RBP10.46□□□□□ -0.73
SLIRP-212ENST00000613856 BRIX1Q8TDN6 353 aaKnown RBP10.46□□□□□ -0.73
SLIRP-212ENST00000613856 PSMF1Q92530 271 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 TMCO6Q96DC7 493 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 PRRC1Q96M27 445 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 SECISBP2Q96T21 854 aaKnown RBP10.46□□□□□ -0.73
SLIRP-212ENST00000613856 EPYCQ99645 322 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 WFDC6Q9BQY6 131 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 VCX3BQ9H321 246 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 NTN4Q9HB63 628 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 HHATLQ9HCP6 504 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 ATP13A2Q9NQ11 1180 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 C8orf4Q9NR00 106 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 RLIMQ9NVW2 624 aa10.46□□□□□ -0.73
SLIRP-212ENST00000613856 ERRFI1Q9UJM3 462 aaPredicted RBP10.46□□□□□ -0.73
SLIRP-212ENST00000613856 FAM32AQ9Y421 112 aaKnown RBP10.46□□□□□ -0.73
SLIRP-212ENST00000613856 C2CD3Q4AC94 2353 aa10.46□□□□□ -0.74
SLIRP-212ENST00000613856 OTOGQ6ZRI0 2925 aa10.46□□□□□ -0.74
SLIRP-212ENST00000613856 H3BNH8 94 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 AP3D1O14617 1153 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 ADAM10O14672 748 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 PEX1O43933 1283 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 CSTAP01040 98 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 UBL4AP11441 157 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 PRF1P14222 555 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 PEX2P28328 305 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 VHLP40337 213 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 SOX3P41225 446 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 FBXW4P57775 412 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 RPP38P78345 283 aaKnown RBP10.45□□□□□ -0.74
SLIRP-212ENST00000613856 SKP2Q13309 424 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 CD226Q15762 336 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 MEP1AQ16819 746 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 C1QL3Q5VWW1 255 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 APOOLQ6UXV4 268 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 DEF8Q6ZN54 512 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 MAMDC2Q7Z304 686 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-212ENST00000613856 ZNF550Q7Z398 422 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 RBM45Q8IUH3 476 aaKnown RBP10.45□□□□□ -0.74
SLIRP-212ENST00000613856 EPHX4Q8IUS5 362 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 OFCC1Q8IZS5 231 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 SVOPLQ8N434 492 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 CLEC1AQ8NC01 280 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 PIK3C3Q8NEB9 887 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 TOR1AIP2Q8NFQ8 470 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 NRG4Q8WWG1 115 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 ASB15Q8WXK1 588 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 CNOT9Q92600 299 aaKnown RBP10.45□□□□□ -0.74
SLIRP-212ENST00000613856 NRBF2Q96F24 287 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 THOC3Q96J01 351 aaKnown RBP10.45□□□□□ -0.74
SLIRP-212ENST00000613856 C9orf16Q9BUW7 83 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 TBL1XR1Q9BZK7 514 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 LHPPQ9H008 270 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 SEMA6AQ9H2E6 1030 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 CDCP1Q9H5V8 836 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 REEP1Q9H902 201 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 ZBTB20Q9HC78 741 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-212ENST00000613856 PRDM4Q9UKN5 801 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 A4GNTQ9UNA3 340 aa10.45□□□□□ -0.74
SLIRP-212ENST00000613856 WIPF3A6NGB9 483 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 J3KTA2 159 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 MASP2O00187 686 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 FAAHO00519 579 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 GNGT2O14610 69 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 TP53I11O14683 189 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 FFAR1O14842 300 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 ZNF264O43296 627 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 FRS3O43559 492 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms