RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 IL20RBQ6UXL0 311 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 GDPGP1Q6ZNW5 385 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 RANBP3LQ86VV4 465 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 SPACA7Q96KW9 195 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 LMF1Q96S06 567 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 SIAEQ9HAT2 523 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 NLGN3Q9NZ94 848 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 H2AFY2Q9P0M6 372 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 A0A0J9YY10 115 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 FABP12A6NFH5 140 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 GABRPO00591 440 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR10H2O60403 315 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 PPP1R3DO95685 299 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 MAOBP27338 520 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 PSG6Q00889 435 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 ARMC4Q5T2S8 1044 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 TMEM53Q6P2H8 277 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 PARGQ86W56 976 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 NR2C2APQ86WQ0 139 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 C7orf57Q8NEG2 295 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 ATP6V1C2Q8NEY4 427 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR10H4Q8NGA5 316 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 GPBAR1Q8TDU6 330 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 PTP4A1Q93096 173 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 SENP5Q96HI0 755 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 SCML1Q9UN30 329 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 EXOSC1Q9Y3B2 195 aaKnown RBP13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 ABCA7Q8IZY2 2146 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 BHLHE40O14503 412 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 TMCC2O75069 709 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 IL1AP01583 271 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 CSF3P09919 207 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 CTSEP14091 401 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 HTR1FP30939 366 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 POU6F2P78424 691 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 GLYR1Q49A26 553 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 EOGTQ5NDL2 527 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 CADM2Q8N3J6 435 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 SLC44A3Q8N4M1 653 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 ASB12Q8WXK4 309 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 RELTQ969Z4 430 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 BPIFA2Q96DR5 249 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 DNAJA3Q96EY1 480 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 TNFRSF13CQ96RJ3 184 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 CD180Q99467 661 aa13.03□□□□□ -0.32
PCDHGA3-202ENST00000612467 MPDZO75970 2070 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 IQCMA0A1B0GVH7 501 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 TNFRSF10CO14798 259 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 DBIP07108 87 aaKnown RBP13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 MAOAP21397 527 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 DRD1P21728 446 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 RPS4Y1P22090 263 aaKnown RBP13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 GABRA5P31644 462 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 PGDP52209 483 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 DEFA1P59665 94 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 DEFA3P59666 94 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 PYDC2Q56P42 97 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 NIPAL3Q6P499 406 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 ZNF322Q6U7Q0 402 aaPredicted RBP13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 TMEM91Q6ZNR0 172 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 RNF44Q7L0R7 432 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 LRRC17Q8N6Y2 441 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 ARIH2OSQ8N7S6 290 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 CDRT4Q8N9R6 151 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 GATSQ8NAP1 163 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 TXNDC15Q96J42 360 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 DMRTB1Q96MA1 342 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 HS6ST2Q96MM7 605 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 FN3KQ9H479 309 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 GRIP1Q9Y3R0 1128 aa13.02□□□□□ -0.32
PCDHGA3-202ENST00000612467 C4orf47A7E2U8 309 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 STK25O00506 426 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 BRINP1O60477 761 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 PLOD3O60568 738 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR2B6P58173 313 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 E2F1Q01094 437 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 CRMP1Q14194 572 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 GJD3Q8N144 294 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 VWA5B2Q8N398 1253 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 KLHL36Q8N4N3 616 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 SLC37A3Q8NCC5 494 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR13C5Q8NGS8 318 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 NEIL3Q8TAT5 605 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 KISS1RQ969F8 398 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 CLIP3Q96DZ5 547 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 C11orf54Q9H0W9 315 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 ANKRD19PQ9H560 264 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 LYRM4Q9HD34 91 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 FRYLO94915 3013 aa13.02□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A1B0GWA3 101 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A1W2PPK0 400 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 HTR3EA5X5Y0 456 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR5K3A6NET4 321 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 SNTNA6NMZ2 147 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 APOA1P02647 267 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 SDHBP21912 280 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 MRPS21P82921 87 aaKnown RBP13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 FOXK2Q01167 660 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 CCINQ13939 588 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 SSX6Q7RTT6 188 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms