RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 NPDC1Q9NQX5 325 aaPredicted RBP11.12□□□□□ -0.63
CBWD3-208ENST00000612050 GLRX2Q9NS18 164 aa11.12□□□□□ -0.63
CBWD3-208ENST00000612050 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.12□□□□□ -0.63
CBWD3-208ENST00000612050 P2RX2Q9UBL9 471 aa11.12□□□□□ -0.63
CBWD3-208ENST00000612050 EMC9Q9Y3B6 208 aa11.12□□□□□ -0.63
CBWD3-208ENST00000612050 KCNE3Q9Y6H6 103 aa11.12□□□□□ -0.63
CBWD3-208ENST00000612050 FAM234BA2RU67 622 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 TUBAL3A6NHL2 446 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 C17orf51A8MQB3 221 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 SCN2BO60939 215 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 CRATP43155 626 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 SLC6A8P48029 635 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 KCNJ5P48544 419 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 AGFG1P52594 562 aaKnown RBP11.11□□□□□ -0.63
CBWD3-208ENST00000612050 AQP5P55064 265 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 CASP9P55211 416 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 SORDQ00796 357 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 SELENBP1Q13228 472 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 ZNF141Q15928 474 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 TIGD2Q4W5G0 525 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 HBMQ6B0K9 141 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 HEPHL1Q6MZM0 1159 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 ADGRE4PQ86SQ3 457 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 LUZP2Q86TE4 346 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 PEX5LQ8IYB4 626 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 LILRA2Q8N149 483 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 RAB8BQ92930 207 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 TEX37Q96LM6 180 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 TRNT1Q96Q11 434 aaKnown RBP11.11□□□□□ -0.63
CBWD3-208ENST00000612050 OR52B2Q96RD2 323 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 SIKE1Q9BRV8 207 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 SLC39A3Q9BRY0 314 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 ARMC7Q9H6L4 198 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 MRGBPQ9NV56 204 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 NDRG3Q9UGV2 375 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 DOCK7Q96N67 2140 aa11.11□□□□□ -0.63
CBWD3-208ENST00000612050 C9JVG2 144 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 MSTNO14793 375 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 CASKO14936 926 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 KIAA0513O60268 411 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 GSNP06396 782 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 UBTFL6P0CB48 400 aaPredicted RBP11.1□□□□□ -0.63
CBWD3-208ENST00000612050 IL7RP16871 459 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 IGFBP2P18065 325 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 PPIBP23284 216 aaKnown RBP11.1□□□□□ -0.63
CBWD3-208ENST00000612050 CPOXP36551 454 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 CLDN20P56880 219 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 CARD18P57730 90 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 PHC1P78364 1004 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 TMEM44Q2T9K0 475 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 C3orf33Q6P1S2 294 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 DNAJC14Q6Y2X3 702 aaPredicted RBP11.1□□□□□ -0.63
CBWD3-208ENST00000612050 STK32CQ86UX6 486 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 CMIPQ8IY22 773 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 OR2V1Q8NHB1 315 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 FAM222BQ8WU58 562 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 ST8SIA1Q92185 356 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 CPNE4Q96A23 557 aaPredicted RBP11.1□□□□□ -0.63
CBWD3-208ENST00000612050 ZNF845Q96IR2 970 aaPredicted RBP11.1□□□□□ -0.63
CBWD3-208ENST00000612050 KLHL15Q96M94 604 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 TREX2Q9BQ50 279 aaPredicted RBP11.1□□□□□ -0.63
CBWD3-208ENST00000612050 LAT2Q9GZY6 243 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 SLCO1B3Q9NPD5 702 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 TMEM45AQ9NWC5 275 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 ICAM5Q9UMF0 924 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 PROCRQ9UNN8 238 aa11.1□□□□□ -0.63
CBWD3-208ENST00000612050 A0A1W2PNV4 684 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 KDM4EB2RXH2 506 aaPredicted RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 SHISA8B8ZZ34 492 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 NPIPB9F8W1W9 429 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 TNFSF11O14788 317 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 FCMRO60667 390 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 UGT2B17O75795 530 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 GOSR1O95249 250 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 H6PDO95479 791 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 TGM6O95932 706 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 LINGO3P0C6S8 592 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ZCCHC18P0CG32 403 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 PRF1P14222 555 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 FKBP2P26885 142 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 IL12AP29459 219 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 SFTPDP35247 375 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 IDH3AP50213 366 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 SUCLG1P53597 346 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 CRISP3P54108 245 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 DSTNP60981 165 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 SIRPAP78324 504 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 FOXF1Q12946 379 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 QPRTQ15274 297 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ZSWIM7Q19AV6 140 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 LRRC74BQ6ZQY2 392 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ACBD4Q8NC06 268 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ATP6V1C2Q8NEY4 427 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 OR10D3Q8NH80 312 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 FBXO27Q8NI29 283 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 FNDC9Q8TBE3 224 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 PNPT1Q8TCS8 783 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 WDR60Q8WVS4 1066 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 CKAP2Q8WWK9 683 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms