RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CCDC167Q9P0B6 97 aa11.49□□□□□ -0.57
CD9-212ENST00000610354 L3MBTL1Q9Y468 752 aa11.49□□□□□ -0.57
CD9-212ENST00000610354 WDR45Q9Y484 360 aa11.49□□□□□ -0.57
CD9-212ENST00000610354 NOTCH2Q04721 2471 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 A0A087WZY1 265 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 CLDN24A6NM45 220 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 HSPB2A8KAH6 182 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 GTPBP1O00178 669 aaKnown RBP11.48□□□□□ -0.57
CD9-212ENST00000610354 NR5A2O00482 541 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 EIF4E2O60573 245 aaKnown RBP11.48□□□□□ -0.57
CD9-212ENST00000610354 DNAJA2O60884 412 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 KRT75O95678 551 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 NUDT7P0C024 238 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 IGFBP2P18065 325 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 SHC1P29353 583 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 PGM1P36871 562 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 AGFG1P52594 562 aaKnown RBP11.48□□□□□ -0.57
CD9-212ENST00000610354 DLX5P56178 289 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 SF3A3Q12874 501 aaKnown RBP eCLIP11.48□□□□□ -0.57
CD9-212ENST00000610354 FOXF1Q12946 379 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 SKP2Q13309 424 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 FGFBP1Q14512 234 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 SQLEQ14534 574 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 HSPB2Q16082 182 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 CTU2Q2VPK5 515 aaKnown RBP11.48□□□□□ -0.57
CD9-212ENST00000610354 GPAT3Q53EU6 434 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 LRIF1Q5T3J3 769 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 ATAD3BQ5T9A4 648 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 C10orf111Q8N326 155 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 FAM71CQ8NEG0 241 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 FIG4Q92562 907 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 WNT2BQ93097 391 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 SPDL1Q96EA4 605 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 ZNF845Q96IR2 970 aaPredicted RBP11.48□□□□□ -0.57
CD9-212ENST00000610354 ADGRG7Q96K78 797 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 RNF145Q96MT1 663 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 TRNT1Q96Q11 434 aaKnown RBP11.48□□□□□ -0.57
CD9-212ENST00000610354 TMEM120AQ9BXJ8 343 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 LAT2Q9GZY6 243 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 RMND5AQ9H871 391 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 CHST11Q9NPF2 352 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 KCNJ16Q9NPI9 418 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 AP4B1Q9Y6B7 739 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 FBN2P35556 2912 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 DCHS2Q6V1P9 2916 aa11.48□□□□□ -0.57
CD9-212ENST00000610354 ABCA12Q86UK0 2595 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 A0A096LPI6 279 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 TRBV5-3A0A0A0MS03 114 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 A0A0G2JND7 137 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 H3BNH8 94 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 LINC01387J3KSC0 135 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 ZNF264O43296 627 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 SEC14L5O43304 696 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 ADAM11O75078 769 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 RCBTB2O95199 551 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 ANP32DO95626 131 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 NTN1O95631 604 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 IL2RAP01589 272 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 TFPTP0C1Z6 253 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 UBL4AP11441 157 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 ZNF17P17021 662 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 PRKCAP17252 672 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 NCF2P19878 526 aaPredicted RBP11.47□□□□□ -0.57
CD9-212ENST00000610354 RPS4Y1P22090 263 aaKnown RBP11.47□□□□□ -0.57
CD9-212ENST00000610354 ZNF41P51814 821 aaPredicted RBP11.47□□□□□ -0.57
CD9-212ENST00000610354 SF3B4Q15427 424 aaKnown RBP eCLIP11.47□□□□□ -0.57
CD9-212ENST00000610354 C6orf10Q5SRN2 563 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 LRRC74BQ6ZQY2 392 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 ARFGAP2Q8N6H7 521 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 METTL25Q8N6Q8 603 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 OR5W2Q8NH69 310 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 FBXO27Q8NI29 283 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 SMPDL3BQ92485 455 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 ZBTB8AQ96BR9 441 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 THUMPD3Q9BV44 507 aaKnown RBP11.47□□□□□ -0.57
CD9-212ENST00000610354 RSPO3Q9BXY4 272 aaPredicted RBP11.47□□□□□ -0.57
CD9-212ENST00000610354 CCDC134Q9H6E4 229 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 HHATLQ9HCP6 504 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 MED4Q9NPJ6 270 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 TMEM45AQ9NWC5 275 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 LIPT1Q9Y234 373 aa11.47□□□□□ -0.57
CD9-212ENST00000610354 APCP25054 2843 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 A0A0J9YW62 118 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 FAM47E-STBD1D6RA91 191 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 CLIC1O00299 241 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 ETV2O00321 342 aaPredicted RBP11.46□□□□□ -0.57
CD9-212ENST00000610354 HNRNPRO43390 633 aaKnown RBP11.46□□□□□ -0.57
CD9-212ENST00000610354 CSTAP01040 98 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 TMIGD3P0DMS9 266 aaPredicted RBP11.46□□□□□ -0.57
CD9-212ENST00000610354 BMP5P22003 454 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 CTSSP25774 331 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 CRATP43155 626 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 SUMO3P55854 103 aaPredicted RBP11.46□□□□□ -0.57
CD9-212ENST00000610354 DSTNP60981 165 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 RAC1P63000 192 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 IRX1P78414 480 aaPredicted RBP11.46□□□□□ -0.57
CD9-212ENST00000610354 KCNJ10P78508 379 aa11.46□□□□□ -0.57
CD9-212ENST00000610354 LSM11P83369 360 aaKnown RBP eCLIP11.46□□□□□ -0.57
CD9-212ENST00000610354 TXNL4AP83876 142 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms