RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 C18orf25Q96B23 403 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 SDSLQ96GA7 329 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 AKR1E2Q96JD6 320 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 GPA33Q99795 319 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 BCL7BQ9BQE9 202 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 ERP44Q9BS26 406 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 THUMPD2Q9BTF0 503 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 PAXXQ9BUH6 204 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 TSSK1BQ9BXA7 367 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 DEFB126Q9BYW3 111 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 FANCEQ9HB96 536 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 PNO1Q9NRX1 252 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 ZNF275Q9NSD4 429 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 Q9UF83 564 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 CYTH4Q9UIA0 394 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 PSME2Q9UL46 239 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 CARMIL1Q5VZK9 1371 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 TNIKQ9UKE5 1360 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 FAM168BA1KXE4 195 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 CTAGE15A4D2H0 777 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 LRRIQ4A6NIV6 560 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 SAGE2PA6NJ88 616 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 VGLL3A8MV65 326 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 E9PLD3 99 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 NUDT21O43809 227 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 IGKV3-15P01624 115 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 CSF2P04141 144 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 KRT8P05787 483 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 TPM3P06753 285 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 GIG44P09565 113 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 PRKAR2BP31323 418 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 CCR1P32246 355 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 TAGLN2P37802 199 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 RND3P61587 244 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 BDH1Q02338 343 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 ZNF154Q13106 437 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 KCNJ11Q14654 390 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 SYCP1Q15431 976 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 CHI3L2Q15782 390 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 CLEC2AQ6UVW9 174 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 ANKRD37Q7Z713 158 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 CTAGE6Q86UF2 777 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 GPR65Q8IYL9 337 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 CADM2Q8N3J6 435 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 ZCCHC7Q8N3Z6 543 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 ZNF525Q8N782 197 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 FADS6Q8N9I5 356 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 OR8K3Q8NH51 312 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 TMEM80Q96HE8 168 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 GAL3ST1Q99999 423 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 SLC30A2Q9BRI3 323 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 DPH7Q9BTV6 452 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 CAPS2Q9BXY5 557 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 TNFRSF19Q9NS68 423 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 IL20Q9NYY1 176 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 TP53TG3Q9ULZ0 132 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 L3MBTL1Q9Y468 752 aa3.18□□□□□ -1.9
SMCHD1-213ENST00000609587 NDUFS8O00217 210 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 CLDN5O00501 218 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 MAPK13O15264 365 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 POLR2DO15514 142 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 MFN2O95140 757 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 YEATS4O95619 227 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 NPPAP01160 153 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 CHRNA1P02708 482 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 CD55P08174 381 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 GALP22466 123 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 ATP5A1P25705 553 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 PSMA2P25787 234 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 HTR2AP28223 471 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 MAGEA5P43359 124 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 OR1G1P47890 313 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 RPL8P62917 257 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 RGS1Q08116 209 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 OVGP1Q12889 678 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 MAPK6Q16659 721 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 TMEM52BQ4KMG9 183 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 FBXO48Q5FWF7 155 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 CELF3Q5SZQ8 465 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 RIPPLY2Q5TAB7 128 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 SULT1C3Q6IMI6 304 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 UFSP1Q6NVU6 142 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 METAP1DQ6UB28 335 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 GPR137CQ8N3F9 429 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 CNIH3Q8TBE1 160 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 TRUB1Q8WWH5 349 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 C19orf60Q96EN9 201 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 VSIG2Q96IQ7 327 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 IQCGQ9H095 443 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 RHOJQ9H4E5 214 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 CALHM2Q9HA72 323 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 MRPL39Q9NYK5 338 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 CLEC4AQ9UMR7 237 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 SPACA6W5XKT8 324 aa3.17□□□□□ -1.9
SMCHD1-213ENST00000609587 A0A1W2PNU3 283 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 H0YCG3 227 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 CETN3O15182 167 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 CASC3O15234 703 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms