RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 HOXD1Q9GZZ0 328 aa10.58□□□□□ -0.72
CTCFL-221ENST00000608903 PROK2Q9HC23 129 aa10.58□□□□□ -0.72
CTCFL-221ENST00000608903 SH2D2AQ9NP31 389 aa10.58□□□□□ -0.72
CTCFL-221ENST00000608903 ATP13A2Q9NQ11 1180 aa10.58□□□□□ -0.72
CTCFL-221ENST00000608903 C8orf4Q9NR00 106 aa10.58□□□□□ -0.72
CTCFL-221ENST00000608903 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.58□□□□□ -0.72
CTCFL-221ENST00000608903 PNPLA3Q9NST1 481 aa10.58□□□□□ -0.72
CTCFL-221ENST00000608903 ANKRD10Q9NXR5 420 aa10.58□□□□□ -0.72
CTCFL-221ENST00000608903 MRTO4Q9UKD2 239 aaKnown RBP10.58□□□□□ -0.72
CTCFL-221ENST00000608903 TESMINQ9Y4I5 508 aa10.58□□□□□ -0.72
CTCFL-221ENST00000608903 CHCHD2Q9Y6H1 151 aaPredicted RBP10.58□□□□□ -0.72
CTCFL-221ENST00000608903 CPAMD8Q8IZJ3 1885 aa10.58□□□□□ -0.72
CTCFL-221ENST00000608903 ALG1L2C9J202 215 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 TRMUO75648 421 aaKnown RBP10.57□□□□□ -0.72
CTCFL-221ENST00000608903 LYPD3O95274 346 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 IFNW1P05000 195 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 ADRB1P08588 477 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 PRKACGP22612 351 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 LCN1P31025 176 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 EVI2BP34910 448 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 KRT20P35900 424 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 CAPGP40121 348 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 ADH7P40394 386 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 ALDH3A2P51648 485 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 PSMD4P55036 377 aaKnown RBP10.57□□□□□ -0.72
CTCFL-221ENST00000608903 LSM11P83369 360 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTCFL-221ENST00000608903 AIMP2Q13155 320 aaKnown RBP10.57□□□□□ -0.72
CTCFL-221ENST00000608903 RAPSNQ13702 412 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 DAG1Q14118 895 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 ACER2Q5QJU3 275 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 USP51Q70EK9 711 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 NUP54Q7Z3B4 507 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 GRAMD2AQ8IUY3 354 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 BEST3Q8N1M1 668 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 DHRSXQ8N5I4 330 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 TSPAN14Q8NG11 270 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 OR4C15Q8NGM1 316 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 POP5Q969H6 163 aaKnown RBP10.57□□□□□ -0.72
CTCFL-221ENST00000608903 ITFG2Q969R8 447 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 GALNT9Q9HCQ5 603 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 ACER3Q9NUN7 267 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 ACAD8Q9UKU7 415 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 U3KQV3 271 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 G3V2T6 193 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 SCDO00767 359 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 SCO2O43819 266 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 F10P00742 488 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 CSTAP01040 98 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 ITGA3P26006 1051 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 RRM2P31350 389 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 LIMS1P48059 325 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 SSR4P51571 173 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 CDH15P55291 814 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 RGS8P57771 180 aaPredicted RBP10.57□□□□□ -0.72
CTCFL-221ENST00000608903 PPP2R2BQ00005 443 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 CDC20Q12834 499 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 SKP2Q13309 424 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 DCTN2Q13561 401 aaKnown RBP10.57□□□□□ -0.72
CTCFL-221ENST00000608903 INPP5JQ15735 1006 aaPredicted RBP10.57□□□□□ -0.72
CTCFL-221ENST00000608903 MDGA2Q7Z553 956 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 SLC5A8Q8N695 610 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 PHOSPHO1Q8TCT1 267 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 FER1L6-AS2Q96M78 137 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 MCHR1Q99705 422 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 PIP5K1AQ99755 562 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 FUZQ9BT04 418 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 MAN2C1Q9NTJ4 1040 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 RSL24D1Q9UHA3 163 aaKnown RBP10.57□□□□□ -0.72
CTCFL-221ENST00000608903 SLC9A8Q9Y2E8 581 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 CARD8Q9Y2G2 431 aa10.57□□□□□ -0.72
CTCFL-221ENST00000608903 A0A1W2PQD3 144 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 A6NL46 340 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 CPSF4LA6NMK7 179 aaKnown RBP10.56□□□□□ -0.72
CTCFL-221ENST00000608903 H3BSA7 217 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 ANGPTL1O95841 491 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 CCL3P10147 92 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 RHCEP18577 417 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 PSPHP78330 225 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 ZNF117Q03924 483 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 EFR3AQ14156 821 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 EIPR1Q53HC9 387 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 ENTPD8Q5MY95 495 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 JMJD6Q6NYC1 403 aaPredicted RBP10.56□□□□□ -0.72
CTCFL-221ENST00000608903 ZDHHC13Q8IUH4 622 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 ZNF248Q8NDW4 579 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 OR52J3Q8NH60 311 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 THAP4Q8WY91 577 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 TTC9Q92623 222 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 DHRS1Q96LJ7 313 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 CCNL2Q96S94 520 aaPredicted RBP10.56□□□□□ -0.72
CTCFL-221ENST00000608903 OSBPL10Q9BXB5 764 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 LHPPQ9H008 270 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 ING2Q9H160 280 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 NMNAT1Q9HAN9 279 aaPredicted RBP10.56□□□□□ -0.72
CTCFL-221ENST00000608903 MYRFQ9Y2G1 1151 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 LYVE1Q9Y5Y7 322 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 FRYQ5TBA9 3013 aa10.56□□□□□ -0.72
CTCFL-221ENST00000608903 TRBV4-1A0A0J9YWV2 114 aa10.55□□□□□ -0.72
CTCFL-221ENST00000608903 ZNF891A8MT65 544 aaPredicted RBP10.55□□□□□ -0.72
CTCFL-221ENST00000608903 GNGT2O14610 69 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms