RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 FGFBP2Q9BYJ0 223 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 BARHL1Q9BZE3 327 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 METTL7AQ9H8H3 244 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 CHTOPQ9Y3Y2 248 aaKnown RBP4.15□□□□□ -1.75
LINC00397-202ENST00000606785 MROH5Q6ZUA9 1318 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 NSD2O96028 1365 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 PRR23AA6NEV1 266 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 FOXI3A8MTJ6 420 aaPredicted RBP4.14□□□□□ -1.75
LINC00397-202ENST00000606785 POLR2DO15514 142 aaKnown RBP4.14□□□□□ -1.75
LINC00397-202ENST00000606785 ZNF264O43296 627 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 EDIL3O43854 480 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 N4BP1O75113 896 aaKnown RBP4.14□□□□□ -1.75
LINC00397-202ENST00000606785 F10P00742 488 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 H2BFMP0C1H6 154 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 PNMTP11086 282 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 SDC1P18827 310 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 IGFBP5P24593 272 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 LMO2P25791 158 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 CCT3P49368 545 aaKnown RBP4.14□□□□□ -1.75
LINC00397-202ENST00000606785 ARHGDIAP52565 204 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 C14orf28Q4W4Y0 310 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 ARMCX5Q6P1M9 558 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 DOK6Q6PKX4 331 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 USP43Q70EL4 1123 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 MOB3BQ86TA1 216 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 IFNEQ86WN2 208 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 NKAIN4Q8IVV8 208 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 OR10A7Q8NGE5 316 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 RFESDQ8TAC1 157 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 NPRL2Q8WTW4 380 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 RAPGEF5Q92565 580 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 SLC45A3Q96JT2 553 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 CNOT6LQ96LI5 555 aaKnown RBP4.14□□□□□ -1.75
LINC00397-202ENST00000606785 PLIN2Q99541 437 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 CCDC28BQ9BUN5 200 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 PKIBQ9C010 78 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 TRIM4Q9C037 500 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 SGK2Q9HBY8 427 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 MEPEQ9NQ76 525 aaPredicted RBP4.14□□□□□ -1.75
LINC00397-202ENST00000606785 NUDT4Q9NZJ9 180 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 ASIC3Q9UHC3 531 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 ZNF580Q9UK33 172 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 TIMM22Q9Y584 194 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 FRMPD4Q14CM0 1322 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 TTC21BQ7Z4L5 1316 aa4.14□□□□□ -1.75
LINC00397-202ENST00000606785 IGHV3OR16-12A0A075B7B8 117 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 TRABD2BA6NFA1 517 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 LRRIQ4A6NIV6 560 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 ZNF716A6NP11 495 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 SOCS3O14543 225 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 LSM1O15116 133 aaKnown RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 MSH4O15457 936 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 ZW10O43264 779 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 CIB2O75838 187 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 SEMA4FO95754 770 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 S100A9P06702 114 aaKnown RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 ZNF735P0CB33 412 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 TRIM49P0CI25 452 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 TRIM49CP0CI26 452 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 PVRP15151 417 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 HPGDP15428 266 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 OXTRP30559 389 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 CAPGP40121 348 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 GNPDA1P46926 289 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 CASP4P49662 377 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 GSK3BP49841 420 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 HADHBP55084 474 aaKnown RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 RIPPLY1Q0D2K3 151 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 GNA13Q14344 377 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 MAPRE2Q15555 327 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 SLC5A12Q1EHB4 618 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 C17orf58Q2M2W7 97 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 KRTAP24-1Q3LI83 254 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 FBXO48Q5FWF7 155 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 VWA2Q5GFL6 755 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 LGSNQ5TDP6 509 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 TWF2Q6IBS0 349 aaKnown RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 OR8G2PQ6IF36 304 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 RFWD3Q6PCD5 774 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 APTXQ7Z2E3 356 aaKnown RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 TRPM8Q7Z2W7 1104 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 ERICH1Q86X53 443 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 AENQ8WTP8 325 aaKnown RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 LZICQ8WZA0 190 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 SNF8Q96H20 258 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 RPRD1AQ96P16 312 aaPredicted RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 TUBGCP2Q9BSJ2 902 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 CHCHD5Q9BSY4 110 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 KRTAP1-5Q9BYS1 174 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 UPF3BQ9BZI7 483 aaKnown RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 AMBNQ9NP70 447 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 GLRX2Q9NS18 164 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 ETNK2Q9NVF9 386 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 FAM120CQ9NX05 1096 aaKnown RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 ELOVL2Q9NXB9 296 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 ZNF221Q9UK13 617 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 PAIP2BQ9ULR5 123 aaKnown RBP4.13□□□□□ -1.75
LINC00397-202ENST00000606785 PIGLQ9Y2B2 252 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 MAPK8IP3Q9UPT6 1336 aa4.13□□□□□ -1.75
LINC00397-202ENST00000606785 PNPLA6Q8IY17 1366 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms